Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01382 ATGAGAGCATCACAGACACTGTTCCTTTTGCTTTGGTTCTTCTGTGTTTATGCTCCTTCTTCATTTTCCACAAATGTCACGTACGACCATAGGGCATTGGTCATTGATGGCAAGCGCCGAGTCTTGGTCTCTGGTTCTATTCATTACCCGCGTAGCACTCCAGAGATGTGGCCAGACATAATTCAGAAATCCAAAGATGGAGGACTTGATGTGATCGAGACTTACGTTTTCTGGAATTTACACGAACCAGTTCGAGGCCAGTATAATTTTGAAGGTAGGGGAGATTTGGTTAAATTTGTGAAGACAGTAGCAGCAGCAGGTTTATATGTGCATCTCCGGATTGGTCCATACGCATGTGCTGAATGGAACTACGGTGGTTTCCCTCTTTGGCTACATTTTATTCCGGGAATTGAGTTCCGAACAGATAACAAACCATTTGAGAAAGAAATGAAGCGATTCACCGCTAAGATTGTGGATATGATGAAACAAGAGAACTTCTATGCGTCACAGGGAGGACCTATTATTTTGTCTCAGATTGAAAATGAGTATGGGAACATTGATGCAGCCTATGGTCCAGCTGCTAAATCCTACATCAAATGGGCAGCATCAATGGCAACATCTCTTGACACAGGGGTTCCTTGGGTAATGTGCCAACAGACAGATGCTCCTGACCCAATTATTAACACGTGCAATGGATTTTACTGTGATCAATTCCAACCAAACACTAATGCAAAACCAAAAATATGGACTGAGGGTTATACTGGATGGTTTCTTTCATTTGGTGATGCTGTACCTCACAGACCTGTGGAAGATCTTGCATTTGCTGTGGCACGCTTTTTCCAACGAGGTGGAACTTTTAACAATTACTATATGTACCATGGAGGGACTAATTTTGGCAGGGCTTCTGGTGGGCCTTTTGTTGCCAGTAGTTATGATTATGATGCACCAATTGATGAGTATGGAATTGTTAGACAGCCTAAGTGGGGCCACCTTAGAGACCTGCATAAGGCCATAAAACTTTGTGAAGAAGCGTTGACAGCAACTGATCCAACAATTACATCTCTTGGACCAAAAGTAGAGGCTGCAGTTTACAAGACAGGAGCTGTATGTGCTGCTTTCCTTGCCAACATTGCCACATCTGACGCAAAAGTGACCTTCAATGGAAATTCATATCACCTTCCGGCTTGGTCTGTGAGCATCTTACCAGATTGCAAGAATGTAGTGCTTAACACGGCAAAGATTAATTCTGCATCAAGCATTTCAAGTTTCACAACTGAATCTTTAAAAGAGGTTGATGCCTCTGGCTCGGGATGGAGTTGGATTAGTGAACCTATTGGTATTTCAAAAGCTGATTCATTCTCAAAATTTGGGTTACTGGAGCAAATAAATACAACTGCTGATAGAAGTGATTACTTGTGGTACTCATTAAGCATTAATCTTAATACTGGTGCTCAAACTGTCCTTCACATTAAATCCCTTGGTCATGCTCTTCACGCTTTCATAAATGGGAAGCTTGCAGGGAGTAGAACGGGAAACCATGAGAAAGCTAACGTCAAAGTAGACATCCCCATCACACTAGTGTCCGGGAAGAACACAATTGATCTCCTGAGTTTAACCGTGGGACTTCAGAACTATGGAGCTTTTTTCGACACATGGGGTGCAGGGATCACTGGCCCTGTGATATTGAAAGGTTTGAAAAATGGCAGCTCTCTTGATCTGTCCTCCCATATGTGGACATATCAGGTTGGCCTAAAAGGTGAAAATTTAGGTCCATCTAGTGGCAGTTCTGGACAGTGGAACTCACAATCTACCTTACCTACAAACCAACCGTTGATTTGGTACAAGACAAACTTCGCTGCTCCCTCTGGTAGCAATCCAGTTGCAATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAGAGCATTGGGCGATACTGGCCTACATATGCCTCTCCAAGGGGTGGTTGTACTGATTCATGCAATTATAGAGGGGCCTATCAAGCATCCAAATGTCTCCAGAACTGTGGAAAACCATCACAGACATTATACCATGTACCACGGTCATGGTTACGACCTGAAAGCAATACACTTGTATTGTTTGAGGAAGTTGGAGGCAACCCTAAGCAAATCACTTTTGCTACAAAACAGATAGGAAGTGTGTGTTCACATGTATCTGAATCTCATCCTCCACCTGTAGACTCATGGAATTTAGATGAAGAATCAGGAAGAAAAGTAGGGCCTGTACTGTTACTGGAGTGCCCTTATCCTGATCAGGTGATCTCTTCCATTAAATTTGCAAGTTTTGGAACACCTCATGGAACTTGTGGGAACTTCAAACAAGGAAGCTGCAGTAGCAGTCAGGCTCTATCCATTGTGCGGAAGGGCTGCATGGGATTAAGTAGTTGTAGAATTGGAGTATCAATTAATACATTCGGAGATCCATGCAAAGGAGTAGCAAAGAGTTTAGCTGTTGAAGCTTCTTGTGTATAG 2502 0.4313 MRASQTLFLLLWFFCVYAPSSFSTNVTYDHRALVIDGKRRVLVSGSIHYPRSTPEMWPDIIQKSKDGGLDVIETYVFWNLHEPVRGQYNFEGRGDLVKFVKTVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIEFRTDNKPFEKEMKRFTAKIVDMMKQENFYASQGGPIILSQIENEYGNIDAAYGPAAKSYIKWAASMATSLDTGVPWVMCQQTDAPDPIINTCNGFYCDQFQPNTNAKPKIWTEGYTGWFLSFGDAVPHRPVEDLAFAVARFFQRGGTFNNYYMYHGGTNFGRASGGPFVASSYDYDAPIDEYGIVRQPKWGHLRDLHKAIKLCEEALTATDPTITSLGPKVEAAVYKTGAVCAAFLANIATSDAKVTFNGNSYHLPAWSVSILPDCKNVVLNTAKINSASSISSFTTESLKEVDASGSGWSWISEPIGISKADSFSKFGLLEQINTTADRSDYLWYSLSINLNTGAQTVLHIKSLGHALHAFINGKLAGSRTGNHEKANVKVDIPITLVSGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGSSLDLSSHMWTYQVGLKGENLGPSSGSSGQWNSQSTLPTNQPLIWYKTNFAAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYASPRGGCTDSCNYRGAYQASKCLQNCGKPSQTLYHVPRSWLRPESNTLVLFEEVGGNPKQITFATKQIGSVCSHVSESHPPPVDSWNLDEESGRKVGPVLLLECPYPDQVISSIKFASFGTPHGTCGNFKQGSCSSSQALSIVRKGCMGLSSCRIGVSINTFGDPCKGVAKSLAVEASCV 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01382 833 ProSiteProfiles SUEL-type lectin domain profile. 747 833 IPR000922 GO:0030246
Spst11g01382 833 FunFam Beta-galactosidase 22 341 - -
Spst11g01382 833 PRINTS Glycosyl hydrolase family 35 signature 636 652 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 PRINTS Glycosyl hydrolase family 35 signature 609 623 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 CDD Gal_Rha_Lectin_BGal 750 832 - -
Spst11g01382 833 FunFam Beta-galactosidase 585 725 - -
Spst11g01382 833 SUPERFAMILY (Trans)glycosidases 24 342 IPR017853 -
Spst11g01382 833 Gene3D Glycosidases 20 341 - -
Spst11g01382 833 PANTHER BETA-GALACTOSIDASE RELATED 16 757 IPR001944 GO:0004553|GO:0005975
Spst11g01382 833 Gene3D - 748 833 IPR043159 -
Spst11g01382 833 Pfam Beta-sandwich domain in beta galactosidase 348 414 IPR041392 -
Spst11g01382 833 FunFam Beta-galactosidase 290 415 - -
Spst11g01382 833 Pfam Galactose binding lectin domain 755 832 IPR000922 GO:0030246
Spst11g01382 833 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Spst11g01382 833 SUPERFAMILY Galactose-binding domain-like 398 565 IPR008979 -
Spst11g01382 833 Gene3D - 576 725 - -
Spst11g01382 833 SUPERFAMILY Galactose-binding domain-like 577 740 IPR008979 -
Spst11g01382 833 Gene3D - 447 572 - -
Spst11g01382 833 FunFam Beta-galactosidase 416 564 - -
Spst11g01382 833 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01382 Spst-Chr11 38239870 38245891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01382 23 686 Glycoside Hydrolase AT2G28470 75.037 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01382 - - gmx:100793198 1513.43