Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01379 ATGAAGCAATTAACCCTTTTCTCCTTCTCATTCTTCCAACTCTTTTCCTCTACCACCTTCGCCATTTCACCCGCCGCACCTAAAGCAGCCCCTGCAGCAAAAACACCCCCTATCCCAAAGGCTGCAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAGTCTCCGGACTCCCCTGACTCTGTCCCTGATGGCATCACTAGAATCCTCAAAAAGGCCAAAATGTTCTCAACCTTAATCCGCCTCCTCAAAACCACCGAAATCATGAACAACATCAACTCACAGCTCATAACAGCCATGAGTGGGGGCATAACCATCCTTGCACCAGATGACTCCGCCTTTTCCAACCTCAAAGCAGGCTTCCTCAACTCCCTAAACAAAGGCCAGAAAAAAAGAACTCGCAATTTCTCAGTAACTGATAAGGCTCCAGCTTTCGCTCCTTCATCTCTTGCAAAGGCTCCCAAAGCTTCTAAGGAAAACTCTTCTGAGGACGAACAGAATGAAACACAAGATGATCACAAAAATCGAGGACAGTGA 540 0.4722 MKQLTLFSFSFFQLFSSTTFAISPAAPKAAPAAKTPPIPKAAAPSPKPLVPTLPQSPDSPDSVPDGITRILKKAKMFSTLIRLLKTTEIMNNINSQLITAMSGGITILAPDDSAFSNLKAGFLNSLNKGQKKRTRNFSVTDKAPAFAPSSLAKAPKASKENSSEDEQNETQDDHKNRGQ 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01379 179 SUPERFAMILY FAS1 domain 46 132 IPR036378 -
Spst11g01379 179 ProSiteProfiles FAS1/BIgH3 domain profile. 64 179 IPR000782 -
Spst11g01379 179 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 137 IPR045003 -
Spst11g01379 179 MobiDBLite consensus disorder prediction 158 179 - -
Spst11g01379 179 MobiDBLite consensus disorder prediction 30 58 - -
Spst11g01379 179 Gene3D FAS1 domain 65 167 IPR036378 -
Spst11g01379 179 MobiDBLite consensus disorder prediction 29 63 - -
Spst11g01379 179 MobiDBLite consensus disorder prediction 130 179 - -
Spst11g01379 179 Pfam Fasciclin domain 76 132 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01379 Spst-Chr11 38227492 38229969 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01379 - - pvu:PHAVU_011G074500g 177.948