Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01378 ATGCATTTCATCAATGCATCAATTGCACATTGCAATTACAGTTGTTATCATTTGCAATCATTTCAAATATCATCCAAAGCTTCATTCAACAAAAGCAAAATGATCAAAAAGCAAGGTTTCTTGTCCTTCTTACTACCATTGCTACTTTCATTTTTGTATTCCACAACCATTTTAGCCCAATTATCACCAGCTTCTGCCCCTCTCAAACCACCCCAACCTGTCCCAACCCCACCAGCTGAGGCTCCTAAACCATTGGTTCCCTCATTGCCAGAGTCACCAAGTGATTCCACCCCTGAAACTCCAACTGTTGATATTGTTGGAATCCTGAGGCAGGCAAAGTCATTCAACATCCTTATCCGTCTCATGAAAACCACCCAATTGATTAACCAACTCAATGCACAACTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGTGCCTTCTCTGAACTCAAAGCAGGTTTCCTCAACTCTCTTTCAGATGGCCAAAAGCTCGAGCTCTTACAGTTCCACGTTCTATCAGACTACGTATCTAGCTCAAACTTTGATACTCTAACCAACCCTGTGAGAACACTTGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGTAGTGTGAACATCTCAACGGGTGAGGTTAACACAACCATCACTGGAATTGTATACACGGATAAGCATCTTGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCTATGGATTTTTTCACTGTTGCTAAGGCACCTGCGAAGGCACCCTCATTGGCTCCAGAACCTTCAAGTGGTGTAGCAAAGGCGCCTAAAACTGATACGGATGAGTCATCATCTTCAGATTCCTCACATGTTAATCCTACAGAACAGAACTCTGGAACCGAGAAGATCAGTGTGCACGGAAATTTAGTGCCACTTGGACTTGGAGTTGCACTTGCACTTGTGGCGACAATTATCTGA 978 0.4376 MHFINASIAHCNYSCYHLQSFQISSKASFNKSKMIKKQGFLSFLLPLLLSFLYSTTILAQLSPASAPLKPPQPVPTPPAEAPKPLVPSLPESPSDSTPETPTVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFTVAKAPAKAPSLAPEPSSGVAKAPKTDTDESSSSDSSHVNPTEQNSGTEKISVHGNLVPLGLGVALALVATII 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01378 325 Gene3D FAS1 domain 88 248 IPR036378 -
Spst11g01378 325 SMART fasc_3 144 249 IPR000782 -
Spst11g01378 325 ProSiteProfiles FAS1/BIgH3 domain profile. 102 246 IPR000782 -
Spst11g01378 325 MobiDBLite consensus disorder prediction 285 302 - -
Spst11g01378 325 SUPERFAMILY FAS1 domain 95 249 IPR036378 -
Spst11g01378 325 MobiDBLite consensus disorder prediction 67 102 - -
Spst11g01378 325 MobiDBLite consensus disorder prediction 67 91 - -
Spst11g01378 325 FunFam Fasciclin-like arabinogalactan protein 11 88 248 - -
Spst11g01378 325 MobiDBLite consensus disorder prediction 261 302 - -
Spst11g01378 325 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 41 288 IPR045003 -
Spst11g01378 325 Pfam Fasciclin domain 114 248 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01378 Spst-Chr11 38224142 38225119 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01378 - - gmx:100794280 416.387