Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01376 ATGGCCATTTCACTGGCACCTGCAGCAGCCCCAAAAGCCCCTGCAGCTAAAACCCCACATACTCCAAAGGCTGCAGCACCATCACCAAAACCGTTAGTCCCCACATTACCTCAGTCTCCAGATTCCCCTGACTCTGTCCCTGACGACATCACCAGAATACTCAAAAAGGCCAAAATTTTCTCAACCCTAATCCGCCTCCTCAAAACCACTGAAATCATGAACAACATCAACTCACAGCTCATAACAGCCAAGAACGGGGGCATAACCATTCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCTGGCTTCCTCAATTCCCTTAATGCAGGACAGAAAATCGAACTTGTGCAGTTCCACATATTGCCAGAGTTTGTGTCCACCTCAAACTTTGATTCTCTAAACAACCCTGTGCAGACAGTGGCTGGAAAAGACCCTGTAAGGCTTCCATTGAACGTGAATGCATTAGGTAATAGTGTCAACATCTCAACTGGGGTGGTCGATGCCACCATTCTGGGGGTAGTGTACTCGGATAATAAACTTGGGATTTATCACGTGGACAAGGTGCTTCTTCCTCTAGATTTCTTTGTAACTGATAAGGCTCCAGCTTTGGCTCCTTCATCTCTTGCAAAGGCTCCCAAAGCAGCTAAGGAAAACTCTTCTGACGACGATCAAGAAGAAACAAACCAGGATCACAATAAATCTGGGGCACTCAGTTTGGGTAGCATTAGTGGAACAAAGTTGATATCAGTTGGAATAGCCTTGGTCACTATGGCAACCATGTGGAGTTGA 795 0.4629 MAISLAPAAAPKAPAAKTPHTPKAAAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKIFSTLIRLLKTTEIMNNINSQLITAKNGGITILAPDDSAFSNLKAGFLNSLNAGQKIELVQFHILPEFVSTSNFDSLNNPVQTVAGKDPVRLPLNVNALGNSVNISTGVVDATILGVVYSDNKLGIYHVDKVLLPLDFFVTDKAPALAPSSLAKAPKAAKENSSDDDQEETNQDHNKSGALSLGSISGTKLISVGIALVTMATMWS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01376 264 SUPERFAMILY FAS1 domain 30 194 IPR036378 -
Spst11g01376 264 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 244 IPR045003 -
Spst11g01376 264 Pfam Fasciclin domain 60 193 IPR000782 -
Spst11g01376 264 MobiDBLite consensus disorder prediction 24 41 - -
Spst11g01376 264 MobiDBLite consensus disorder prediction 1 48 - -
Spst11g01376 264 MobiDBLite consensus disorder prediction 217 232 - -
Spst11g01376 264 ProSiteProfiles FAS1/BIgH3 domain profile. 47 191 IPR000782 -
Spst11g01376 264 MobiDBLite consensus disorder prediction 209 239 - -
Spst11g01376 264 Gene3D FAS1 domain 35 193 IPR036378 -
Spst11g01376 264 SMART fasc_3 89 194 IPR000782 -
Spst11g01376 264 FunFam Fasciclin-like arabinogalactan protein 11 35 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01376 Spst-Chr11 38218205 38218999 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01376 - - pvu:PHAVU_011G074500g 417.542