Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01375 ATGGAGCAGTTAGTTTTATTCTCCCTCTTACTCCTCATACCTTTTTCCTCCTTATACTCGACCACATTAGCCCAAACAACTGCTGCAGCTCCATCAAAACCAATTGTCCCAACACTACCCCAGACACCCTCTTCAGACACCTCTGATTCTTCCCCTGATGACATCATCAGAATATTAAGGAAGGCCAAATCATTCAACGTCCTAATTCGTCTAATGAAAACCACCCAATTGATCAACCAAATCAATGCTCAGCTCATAACCATAAAATCAGGTGGCTTAACCATCTTTGCCCCAGATGACAATAGCTTTTCACAACTCAAAGTAGGATTTCTCAACTCTCTGGGTGACAATCAAAAGATCGAACTCCTGCAGTTCCATATTCTTCCCACGTACGTTTCAAGCTTAAACTTTGATTCTCTGAGCAACCCGGTGAGAACACTAGCTGGGGATAACCCTGCCAGGTTGCAACTAAACGTGACTTCATATGGCAACAATGTGAATATCTCAACAGGAGTGGTTAATGCCACGGTCACAGGAGTGGTATACTCAGATAAGGTACTTGCTATATATCATGTGGATAAGGTGCTTCTTCCTTTGGACTTCTTCAAGCCTAAGCCAACCTCTCCCGCACCCTCTCCTGCAATAGCGCCAAAAGCTGATAATGATAACTCATCCGCTGATGATAGCCTTGGAACATCCAAGGACAGCGCTGGCTCATGCAGTTTGATGAGTACTCAAGGAACAACGTTGGTGTCCCTTGGAGTTGCTTTAGTTGGATTGGTGATTCTTTCAAGTTGA 798 0.4411 MEQLVLFSLLLLIPFSSLYSTTLAQTTAAAPSKPIVPTLPQTPSSDTSDSSPDDIIRILRKAKSFNVLIRLMKTTQLINQINAQLITIKSGGLTIFAPDDNSFSQLKVGFLNSLGDNQKIELLQFHILPTYVSSLNFDSLSNPVRTLAGDNPARLQLNVTSYGNNVNISTGVVNATVTGVVYSDKVLAIYHVDKVLLPLDFFKPKPTSPAPSPAIAPKADNDNSSADDSLGTSKDSAGSCSLMSTQGTTLVSLGVALVGLVILSS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01375 265 Pfam Fasciclin domain 64 198 IPR000782 -
Spst11g01375 265 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 245 IPR045003 -
Spst11g01375 265 FunFam Fasciclin-like arabinogalactan protein 11 38 198 - -
Spst11g01375 265 MobiDBLite consensus disorder prediction 218 232 - -
Spst11g01375 265 ProSiteProfiles FAS1/BIgH3 domain profile. 52 196 IPR000782 -
Spst11g01375 265 Gene3D FAS1 domain 32 198 IPR036378 -
Spst11g01375 265 SUPERFAMILY FAS1 domain 51 199 IPR036378 -
Spst11g01375 265 MobiDBLite consensus disorder prediction 208 232 - -
Spst11g01375 265 SMART fasc_3 94 199 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01375 Spst-Chr11 38214897 38215694 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01375 - - gmx:100791112 342.043