Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01374 ATGGGAGAAGGAGAGAAATTTGCATGGGGATCTGCTACAACAACTGAACTTTCTAAAGGAACATTCCACCTAACTCAAACAAAACAAACCCCTCTCACTCTTTCAGCTTTCCATATATTCTCCTCCCTCCATCACCCCCACATCAAACTCTCACTTCAAGGACCACTCTTCCTTTCTCTCCACCATCCCCACTTCAGTCAACAAAAGATGGTGATCATGAAGCATTCACTCTCCTCTCTTACCCTCCCACTTCTTCTAATACTACTCTTTTCCCATCACACCTCTTTAGCCCAGTCGCCCGCCGCGGCCCCAACCGCTCCCACCACTGCCACCACCGCCACTGCTCCGGCCCCGGTACCCTCCTCACCCCCCACAGACATAATCAGAATCCTCAAAAAGGCCGGAGGGTTCACCACCCTAATTCGTCTCCTTCAGGCCACACAGGTATCCAACCAAATCAATTCCCAACTCCTTACTTCAAACGGTGGCTTAACCTTATTTGCACCAAACGACAATGCCTTTTCAAGCCTCAAACCTGGCTTCCTCAACTCCCTCAATGACCAACAAAAGAACGAACTCATCCAATTCCACTTGCTACCCACATTCGTTTCCGTTTCAAACTTTGACACTCTAAGCAACCCTGTTAGAACGCAGGCCGGTGAGAACCCTGATAGGTTGGCGCTGAATATAACAAGCTCTGGAGGGAACCAAGTGAACATGACAACGGGCATTGTCAACGTTACATTGGGTGGCACTGTGTACACTGATCACCAGCTTGCGGTTTACCAAGTGGACAAGGTGCTTCTTCCTCGAGATTTCTTTGTTGCTAAGCCTCCTGCTCCAGCTCCGGCGCCAGAAAAGCCTAAGGGGTCTAAGAAGAAATCTGCAGACAGCACTTCAACTCCTGCAGATGATGCTGAATCTGCTGCTATCAGTGTGAAACAGCAGCGTGTGATGTGGGTTGCTGTTACTTCCCTTGTAGTTGCAGCATTTTCGTGGTGA 1002 0.493 MGEGEKFAWGSATTTELSKGTFHLTQTKQTPLTLSAFHIFSSLHHPHIKLSLQGPLFLSLHHPHFSQQKMVIMKHSLSSLTLPLLLILLFSHHTSLAQSPAAAPTAPTTATTATAPAPVPSSPPTDIIRILKKAGGFTTLIRLLQATQVSNQINSQLLTSNGGLTLFAPNDNAFSSLKPGFLNSLNDQQKNELIQFHLLPTFVSVSNFDTLSNPVRTQAGENPDRLALNITSSGGNQVNMTTGIVNVTLGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKPKGSKKKSADSTSTPADDAESAAISVKQQRVMWVAVTSLVVAAFSW 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01374 333 MobiDBLite consensus disorder prediction 279 308 - -
Spst11g01374 333 MobiDBLite consensus disorder prediction 101 122 - -
Spst11g01374 333 SUPERFAMILY FAS1 domain 107 271 IPR036378 -
Spst11g01374 333 MobiDBLite consensus disorder prediction 101 116 - -
Spst11g01374 333 SMART fasc_3 165 271 IPR000782 -
Spst11g01374 333 Gene3D FAS1 domain 101 271 IPR036378 -
Spst11g01374 333 FunFam Fasciclin-like arabinogalactan protein 11 102 270 - -
Spst11g01374 333 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 79 321 IPR045003 -
Spst11g01374 333 ProSiteProfiles FAS1/BIgH3 domain profile. 124 268 IPR000782 -
Spst11g01374 333 Pfam Fasciclin domain 136 270 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01374 Spst-Chr11 38210407 38211814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01374 - - gmx:100791643 387.111