Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01372 ATGAGAGCGACACTTATTCTGTTCGTTTTGCTTTGGTTCTTCTGCGTTTATGCCCCTGCTTCGTTTTGTGCAAATGTCACTTATGACCACCGAGCATTGGTCATCGATGGCAAGCGCCGAGTCTTGGTCTCTGGTTCTATTCATTATCCTCGTAGCACTCCAGAGATCTGGCCAGACCTTATTCAGAAATCCAAAGATGGAGGACTTGATGTGATTGAGAGTTATGTTTTCTGGAACTTACACGAACCAGTTCGAGGCCAGTACAACTTTGAAGGTAGGGCAGATTTGGTTAAATTTGTGAAAGCAGTAGCAGCAGCAGGTCTATATGTGCATCTCCGGATTGGTCCATACGCATGTGCTGAATGGAACTACGGTGGTTTCCCTGTTTGGCTACATTTTATTCCGGGAGTTCAGTTCCGAACTGATAACCAACCATTCGAGGCAGAAATGAAGCGGTTCACTGCTAAGATTGTGGATATGATGAAACAAGAGAACCTCTATGCATCACAGGGAGGACCTATCATTTTGTCTCAGGTTGAAAATGAGTATGGAAACATTGATGCAGCCTATGGTCTGGCTGCTAAATCCTACATCAAATGGGCAGCATCAATGGCAACATCTCTTGATACAGGGGTTCCTTGGGTAATGTGCCAACAGGCAGATGCTCCTGACCCAATTATTAACACATGCAATGGATTTTACTGCGATCAATTCAATCCAAACTCTAACTCGAAACCAAAAATATGGACTGAGAACTGGAGTGGATGGTTTCTTTCATTTGGTGGTGCTGTGCCTTACAGACCAGTGGAAGATCTTGCTTTTGCTGTGGCACGCTTTTACCAGCGAGGTGGAACTTTTCAGAATTACTATATGTACCATGGAGGGACTAATTTTGGCCGAACTACTGGTGGACCTTTCATTTCTACTAGTTATGATTATGATGCTCCAATTGATGAGTATGGAATTGTTAGGCAGCCCAAGTGGGGCCACCTTAAAGATGTGCATAAGGCCATAAAGCTTTGTGAAGAAGCACTGATAGCAACTGATCCAACGATTACAAGTCCTGGACCAAATATAGAGGCTGCAGTTTACAAGACAGGATCTGTATGTGCAGCCTTCCTTGCCAACATTGCCACATCTGATGCACAAGTGACCTTTAATGGAAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTAGTGCTTAATACTGCAAAGATTAATTCTGCATCTATGATTTCAAGCTTCACAACTGAATCCTTAAAAGAAGAGGTTGATTCTGGATCAGGATGGAGTTGGATTAGTGAACCAGTTGGTATTTCAAAGGCTGATTCATTCTCAAAATTTGGATTACTGGAGCAAATAAATACAACCGCTGATAAAAGTGATTATTTGTGGTACTCATTAAGCATTGATCTTGAAGATGATGCTGGTTCTCAAACTGTCCTTCATATTGAGTCCCTTGGTCATGCCCTTCATGCTTTCATAAATGGGAAGCTTGCAGGGGGTGGAACTGGCAACAGTGACAAAGCTAAGGTCAAAGTAGACATCCCCATCACACTAGTGGCTGGGAAGAACACAATTGATCTCCTGAGTTTAACAGTGGGACTGCAGAACTATGGAGCTTTTTTTGACACATGGGGTGCCGGGATCACTGGTCCAGTGATATTGAAAGGTTTGAACAATGGAAGCACTGTTGATCTCTCCTCCCAACAGTGGACATATCAGGTTGGCCTTAAAGGTGAAGATTTAGGTCCATCAAGTGGAAGTTCTGGACAGTGGAATTCACAATCGTCCTTACCTACAAATCAGCCTTTGACATGGTACAAGACAAACTTTGTTGCTCCCTCCGGAAGTAATCCAGTTGCTATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTGAATGGACAGAGCATTGGTCGATACTGGCCTACATATGTCTCTCCAAATGGAGGTTGTACTGACATGTGCAATTATAGAGGGGCCTATAGTTCATCCAAATGTCTCAAGAACTGTGGGAAACCATCACAGACATTATACCACGTACCACGATCATGGTTACAACCAGACAGCAACACACTTGTATTGTTTGAGGAAAGTGGAGGCGACCCTACGAAGATCTCTTTTGCAACAAAACAGATAGGAAGTGTGTGTTCCCATGTATCTGAATCTCATCCTCCACCTGTAGACTTGTGGAATTCAGATACAAAATCAGGATCAAAAGTAGGGCCTGTACTGTCACTGGAGTGCCCTTATCCTAATCAGGTGTTCTCTTCCATTGAATTTGCAAGTTTTGGAACGCCTTATGGGACTTGTGGGAACTTCAAACATGGACGGTGCAGAAGTAACAAGGCTCTATCCATTGTGCAGAAGGCCTGCATTGGATCAAGCAGTTGTAGAATTGGACTATCAATTAATTCATATGGAGATCCATGTAAAGGAGTAACAAAGAGTTTAGCTGTTGAAGCTTCTTGTGCATAG 2508 0.4342 MRATLILFVLLWFFCVYAPASFCANVTYDHRALVIDGKRRVLVSGSIHYPRSTPEIWPDLIQKSKDGGLDVIESYVFWNLHEPVRGQYNFEGRADLVKFVKAVAAAGLYVHLRIGPYACAEWNYGGFPVWLHFIPGVQFRTDNQPFEAEMKRFTAKIVDMMKQENLYASQGGPIILSQVENEYGNIDAAYGLAAKSYIKWAASMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFNPNSNSKPKIWTENWSGWFLSFGGAVPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGIVRQPKWGHLKDVHKAIKLCEEALIATDPTITSPGPNIEAAVYKTGSVCAAFLANIATSDAQVTFNGNSYHLPAWSVSILPDCKNVVLNTAKINSASMISSFTTESLKEEVDSGSGWSWISEPVGISKADSFSKFGLLEQINTTADKSDYLWYSLSIDLEDDAGSQTVLHIESLGHALHAFINGKLAGGGTGNSDKAKVKVDIPITLVAGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLNNGSTVDLSSQQWTYQVGLKGEDLGPSSGSSGQWNSQSSLPTNQPLTWYKTNFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVSPNGGCTDMCNYRGAYSSSKCLKNCGKPSQTLYHVPRSWLQPDSNTLVLFEESGGDPTKISFATKQIGSVCSHVSESHPPPVDLWNSDTKSGSKVGPVLSLECPYPNQVFSSIEFASFGTPYGTCGNFKHGRCRSNKALSIVQKACIGSSSCRIGLSINSYGDPCKGVTKSLAVEASCA 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01372 835 Gene3D - 745 835 IPR043159 -
Spst11g01372 835 ProSiteProfiles SUEL-type lectin domain profile. 749 835 IPR000922 GO:0030246
Spst11g01372 835 FunFam Beta-galactosidase 416 566 - -
Spst11g01372 835 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 PRINTS Glycosyl hydrolase family 35 signature 611 625 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 PRINTS Glycosyl hydrolase family 35 signature 638 654 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 FunFam Beta-galactosidase 290 415 - -
Spst11g01372 835 Pfam Galactose binding lectin domain 757 834 IPR000922 GO:0030246
Spst11g01372 835 SUPERFAMILY Galactose-binding domain-like 398 568 IPR008979 -
Spst11g01372 835 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Spst11g01372 835 SUPERFAMILY (Trans)glycosidases 26 342 IPR017853 -
Spst11g01372 835 Gene3D - 415 565 - -
Spst11g01372 835 PANTHER BETA-GALACTOSIDASE RELATED 18 752 IPR001944 GO:0004553|GO:0005975
Spst11g01372 835 Gene3D - 567 727 - -
Spst11g01372 835 SUPERFAMILY Galactose-binding domain-like 579 744 IPR008979 -
Spst11g01372 835 FunFam Beta-galactosidase 21 341 - -
Spst11g01372 835 FunFam Beta-galactosidase 587 727 - -
Spst11g01372 835 CDD Gal_Rha_Lectin_BGal 752 834 - -
Spst11g01372 835 Pfam Beta-sandwich domain in beta galactosidase 345 414 IPR041392 -
Spst11g01372 835 Gene3D Glycosidases 20 341 - -
Spst11g01372 835 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01372 Spst-Chr11 38189629 38195378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01372 20 688 Glycoside Hydrolase AT2G28470 76.471 0.0 1085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01372 - - gmx:100793198 1631.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01372 11 38189629 38195378 Spst11g01372 11 38189629 38195378 ECH