Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01370 ATGACAGTGCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGACTATGTGTCCAGCTCCAATTTTGATACTCTAACCAACCCTGTGAGAACACTTGCAGGAGCTAAGCCTGGAAAGGTGGAACTGAATGTGGTAAGTTATGGAGGGAGTGTGAACATCTCAACAGGTGAGGTTAACACAACCATCACTGGCATTGTATACACAGATAAGCGTCTTGCTATTTATAAGGTGGGAAAGGTACTTCTTCCTATGGACTTCTTTGCAGTGGCCAAGGCACCTGCAAAGTCACCCTTGTTGGCACCAGAACCATCTGCAAAGGCTCCTAAAGCGGATAAGGAGAATTCACTGTCCCCAGACTCCTCAGCATCATCTGAGATTAATACCACAAAGGATAACTCTGGCACTGTGAAAATCAATTTGCCCGGAAAGTGGCTGTCCCTTGTTCTTGGAATAGTTCTCATGACTGTTTTCTCACCATAA 528 0.4527 MTVPSLNSKQASSTLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVVSYGGSVNISTGEVNTTITGIVYTDKRLAIYKVGKVLLPMDFFAVAKAPAKSPLLAPEPSAKAPKADKENSLSPDSSASSEINTTKDNSGTVKINLPGKWLSLVLGIVLMTVFSP 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01370 175 SUPERFAMILY FAS1 domain 15 100 IPR036378 -
Spst11g01370 175 Gene3D FAS1 domain 3 99 IPR036378 -
Spst11g01370 175 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 156 IPR045003 -
Spst11g01370 175 MobiDBLite consensus disorder prediction 130 148 - -
Spst11g01370 175 Pfam Fasciclin domain 16 99 IPR000782 -
Spst11g01370 175 MobiDBLite consensus disorder prediction 116 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01370 Spst-Chr11 38187870 38188397 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01370 - - gmx:100790242 267.7