Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01344 ATGGGTATTGGTCGAAATTCATCCTCCAGAAGTGGAGATTACTTGGAAGGGATGCTTAATGACTATGTTGGAGGAAGGAACAAACTGAAGACTCAGAAAAGTGGCTCCACAAAATTTGTTGCAGCACTCACTTGCCTCCAGTTTTTCTTTGCAGTTTATGCAACATTCCTATTATATTACATGGGGCCTTCCATTGATTTAAGAACCAAGCCAGAGTTCACATGGGCTACAAAAATTGCCCAACAATGGAAGCAACTTATGATCACACCCCACGTTGTTGGCCACTACCAAGAAGCTGCTTCCTCTCTCATCAGGGAGGATGTTCTTCCCACAACTACATCACAAGTGTGTGAAAATGAGAAGATAGACTTCCAGCAAAAGAAGTCCAATGACGTCCAAATGATCAAGTTAAAGAGAGAGCTCTATAACGAGGTGTTGAACTTCCAAAGCAAAACCATTGGCACAGAGACTCTCCAAGAGCTAATGGCAATGAAATCCAAGTGGGACTTGAAGGGTCCAAACAGACCAAAAATCACTGTGTTGCTAAATCACTTCAAGAGAAAGACACTTTGCGCTCAGCTTGATTCTTTGCTCCAACAGACCCTCCCATTCCATCATGCTTGGGTTCTTTCATTTGGGAGCCCCAATGAGGCCTCGTTGAGGAGGATCGTGGACACCTATAATGACTCGAGAATCAGTTTCATGAGCTCAAGTTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACTGAAGCTGATCTTGTGTATGTTATTGATGATGACATGATTCCTGGAAGGAAGATGTTACAGATTTTGGCGCATGTGGCTGGGACAGAAAAATATAAGAATTCTGTTTTGGGGAGTATTGGAAGGATTTTGCCTTTTAGACAGAAGGATTTTACATTTCCAAGTTACAGAAAATTTCGGTCTAAGGAGGCAGGGTTGTATTTACCTGATCCCGCTTATGATATCACAATTGATAAAATTGTGCAGGTGGATTTTCTATCTAGTTCGTGGTTTCTTTCTGCTGATCTTGTCAAGACACTATTCATTGAGACACCTTTTACCTTTTCAACCGGTGAAGATCTGCACCTCAGCTATCAGCTTCAAAAGTACAAAAATGCTGGCTCCTTTGTTCTTCCAGTAGACCCTAGGGACAAGGACACTTGGGGAGATAGCGAACACAGGCTTGCATATGTGTCTGAAACCACAGTGATTTTCAAGGACATAGTTCAAGTCAGAGATGATCAATGGTGGAAAGCACTTTCCACAGGTTATGTGACACAGTGGGCTGCAATGTACCCTCAAAAAGTTGATGCACTCTTCTATGCTCACTCAATTGCTGAAGTGAAAGAGCTTGCACCACTTCTTGAAAAATTCAGGTCAACAGTTGGCAAGAAGGCCTACATTGTTGTCTCTGGAGGCAATTTCTGCCCTTGTGAAGATGCTGCAACAACTCTCAAATGGCCTACATTGGTCTGCAAAGAACGTCGGTTCAAGATTTTTGATTTGGCCATTGGATCCCTTTCTGGGGTGTCAGACTCAGAGGCACCAGTGATACATGCAGTGTACACCAGCATGAAGGGTTTGATCAAAATTCACAACCCCAGTGTAGTGATCACTGTTGCTGACATTGATCCTCACGTTAGAAAAGCTCTTAAGATGGCATCAGAAACCAACTCAAATGCTACCACATTGGTTCTTTTACCCAGGGCATCAGTGTCTCAAGTTCTCTGGATGGCTGATCTGCGTTCAACAGCATTACCAAACTGGAACCGGATGAGGATTTCTGTGAACATTATCACCCAGAATAGAGCCAATTCACTAACAAGGCTTCTCAAATCTCTAAGCAATGCCTACTATCTTGGAGATGAAATTCCCATTACCTTCAACATGGATAGCAAGGTAGATGAGGAAACTGTAAGACTGGTAGGTTCATTTGAGTGGCCTCATGGGCCCAAAACCCTGAGAAGGAGAATCATCCAAGGTGGTCTCATCCGTGCTGTGAGTGAAAGTTGGTATCCCTCTTCTGATGATGACTTTGGTCTCCTACTAGAAGATGACATTGAAGTTTCCCCTTACTACTACCTGTGGATCAAATATGCACTCATGGCTTACCACTATGACCCTCAAGTCTCTCTCCCTGAGCTCTCCTCCATCTCCCTCTACACTCCAAAGCTTGTTGAAGTTGTCAAAGAGAGACCCAAATGGAATGCCACAGAATTCTTCAAACGCATCCACCCCAACACACCTTACCTTCACCAACTACCATGCAGCTGGGGGGCAGTGTTCTTCCCCAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTCAGGATGCCAAATCCAACCCAGTTCAAATTCCAAAGTCTAGAACAAATGGATGGCAAGCTTCATGGAAGAAGTTCCTCATAGACATGATGTACCTCAGAGGGTATGTTAGTCTCTACCCAAATTTCCCACAACAAGCAAGCTTTTCAACCAACCATATGGAGCCAGGGGCACACATCAGTGCAAAAGACAATGTGGTTAAGCATGACAAACAGGACTTTGAGGTGCCACTATTGAAAGAAGACTTCAGAAACTTGTTGCCAGCAATGAAGATGCCTCCAGCATCAAAGCTTCCATCTCTAAACCTCTTCAATCAACCCGTTTCTCTAAAGGGTCTCAAAGCAGCAGGAGCTAAGTTGGGACAGGATGTGCTAAGATGTGACAATGCCACTGAGGTTGTTGTTGTTGATAAAGACACTGGTCTACCTTACACCTGCTCCAAATTCTGA 2799 0.4373 MGIGRNSSSRSGDYLEGMLNDYVGGRNKLKTQKSGSTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLMITPHVVGHYQEAASSLIREDVLPTTTSQVCENEKIDFQQKKSNDVQMIKLKRELYNEVLNFQSKTIGTETLQELMAMKSKWDLKGPNRPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHAWVLSFGSPNEASLRRIVDTYNDSRISFMSSSYDFKYYGRFQMALQTEADLVYVIDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITIDKIVQVDFLSSSWFLSADLVKTLFIETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPRDKDTWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQKVDALFYAHSIAEVKELAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAATTLKWPTLVCKERRFKIFDLAIGSLSGVSDSEAPVIHAVYTSMKGLIKIHNPSVVITVADIDPHVRKALKMASETNSNATTLVLLPRASVSQVLWMADLRSTALPNWNRMRISVNIITQNRANSLTRLLKSLSNAYYLGDEIPITFNMDSKVDEETVRLVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKRIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTQDAKSNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHDKQDFEVPLLKEDFRNLLPAMKMPPASKLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCDNATEVVVVDKDTGLPYTCSKF 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01344 932 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 598 847 IPR029044 -
Spst11g01344 932 SUPERFAMILY Nucleotide-diphospho-sugar transferases 175 376 IPR029044 -
Spst11g01344 932 PANTHER OSJNBA0004B13.7 PROTEIN 280 923 - -
Spst11g01344 932 SUPERFAMILY Nucleotide-diphospho-sugar transferases 596 786 IPR029044 -
Spst11g01344 932 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 161 385 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01344 Spst-Chr11 37939381 37943173 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01344 - - gsj:114374559 1785.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01344 11 37939381 37943173 Spst11g01344 11 37939381 37943173 ECH