Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01338 ATGGCCTTCAAAACACTGTTCCATTCCACTTTCGCTTTGCTTCTTGTTTTTGCATTTTGTGCTTTGGAGGCCAATGCTCGCACTCTCCAAGATGCTTCAATTCGTGAAAGGCATGAGCAGTGGATGGCTACATATGGAAAAGTCTACTTGGATTCTTATGAGAAAGAGCAGAGATACCAAATATTCAAGGAAAATGTGCAACGCATAGAGGCATTTAACAATGCTGGAAACAAGCCTTACAAGCTTGGTATTAACCACTTTGCTGATCTCACAAATGAGGAATTCAAAGCCAGAAATAGATTAAAGTGTCATATGGGCTCCACAATAACAAGGACACCCATATTTAAGTATGAACATGTCACAGCATTGCCAACTTCATTGGATTGGAGACAGAAAGGAGCTGTCACACCCATTAAGGACCAAGGCCAATGTGGATCTTGTTGGGCATTTTCTGCTGTGGCAGCGACAGAAGGAATCACCAAGCTGAGTACTGGCAAATTGATCTCTCTATCGGAACAAGAGCTTATTGATTGTGACACAAAGGGTGAGGACCAAGGTTGTGAAGGGGGTTTGATGGACGATGCCTTCAAATTTATCTTGCAGAACAAAGGACTTACCACAGAAGCCACTTACCCTTATGAGGGAATTGATGGAAGAACTTGTAATGCAAAAGCAGAAAGCAACCATGCAGCAAGCATTAAGGGGTACGAGGATGTGCCCGCCAACAGTGAGAGTGCACTGCTCAAAGCTGTTGCTAATCAACCAGTTTCAGTAGCTATTGATGCCAGTGGATATGAGTTTCAGTTTTATTCAGGTGGTGTCTTCAATGGATCATGTGACACTAACTTGGATCATGGTGTCACTGCTGTGGGGTATGGAGTGAGTGACGATGGAACAAAGTATTGGTTGGTGAAGAATTCATGGGGTGTAAAGTGGGGTGAAAAAGGATACATTAGGATGCAAAGAGATGTTGCTGCTAAAGAAGGCTTGTGTGGCATAGCAATGTTGGCTTCTTACCCAACTGCATAA 1029 0.4325 MAFKTLFHSTFALLLVFAFCALEANARTLQDASIRERHEQWMATYGKVYLDSYEKEQRYQIFKENVQRIEAFNNAGNKPYKLGINHFADLTNEEFKARNRLKCHMGSTITRTPIFKYEHVTALPTSLDWRQKGAVTPIKDQGQCGSCWAFSAVAATEGITKLSTGKLISLSEQELIDCDTKGEDQGCEGGLMDDAFKFILQNKGLTTEATYPYEGIDGRTCNAKAESNHAASIKGYEDVPANSESALLKAVANQPVSVAIDASGYEFQFYSGGVFNGSCDTNLDHGVTAVGYGVSDDGTKYWLVKNSWGVKWGEKGYIRMQRDVAAKEGLCGIAMLASYPTA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01338 342 Pfam Cathepsin propeptide inhibitor domain (I29) 38 95 IPR013201 -
Spst11g01338 342 SMART Inhibitor_I29_2 38 95 IPR013201 -
Spst11g01338 342 Gene3D Cysteine proteinases 19 342 - -
Spst11g01338 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 141 152 IPR000169 -
Spst11g01338 342 Pfam Papain family cysteine protease 123 340 IPR000668 GO:0006508|GO:0008234
Spst11g01338 342 FunFam Senescence-specific cysteine protease SAG39 19 342 - -
Spst11g01338 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 301 320 IPR025661 -
Spst11g01338 342 SMART pept_c1 123 341 IPR000668 GO:0006508|GO:0008234
Spst11g01338 342 PRINTS Papain cysteine protease (C1) family signature 301 307 IPR000668 GO:0006508|GO:0008234
Spst11g01338 342 PRINTS Papain cysteine protease (C1) family signature 285 295 IPR000668 GO:0006508|GO:0008234
Spst11g01338 342 PRINTS Papain cysteine protease (C1) family signature 141 156 IPR000668 GO:0006508|GO:0008234
Spst11g01338 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 283 293 IPR025660 -
Spst11g01338 342 SUPERFAMILY Cysteine proteinases 30 341 IPR038765 -
Spst11g01338 342 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 29 335 IPR013128 GO:0008234
Spst11g01338 342 CDD Peptidase_C1A 124 340 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01338 Spst-Chr11 37895141 37896341 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01338 - - gmx:100778111 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01338 11 37895141 37896341 Spst11g01338 11 37895141 37896341 ECH