Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01328 ATGTCCCACTCCCACCAGCATCCACAACCACAACAAAGACGGTTATTATCTCTGTGCCTGAACCAACTTCATGAACACCCTCCTGAAAGCTCCTTCTCATCTTCTCAAACACACTACAAAACCAAAATCCCCTTATGTCTCATTCACCCTCAAACGTCAACTACTCCTCCATCAACCTCCCCACTCTCTTTCTTTGGCCCCAAGATTGTTTCATCATCCCCTCACCAACACTTCTACTTCCATGAACCTCACAGCCCCTCCCTCCGTTGTTGTTTTAATGTCTCTTCCAGGCGTTGGGGTGCCTTCAAGCTTGGTTGCACCTCCATGGACCCTCAAGTAGATTTCTCATCATCACTTCACTCTCCCTCTGAGATTATTAAGAAAAAGAAAATTACTGGGCGGCAGAAGAGAGAGGAACTTGAAAGAGAGGTTTCTATGCTTCAAAGCTTGTTGGACCAAGAAGAAAAGTTCCATGAGATTTTGGAGATGCTGCATAATAGACCGAACGGGTCAGCTATATCAATTCCCAATTTTCTTCCACCCAAGATGAGAGAACTCTTAGGAGAGCTGGTCATGGTAGAGAGTGAAATAGCACGACTTGAAAGCCAAATAAGCCAACTCCAAGCTGGTTTGAAACATGAACAAGAAGTGACCAAGGAATCAAAGTCTAAAACGTGGAATCAAGGGAATTTGAGTAATTCTAACAACCACTTATCAACTTCTCCGATTCCAAATCCTAGTCCTATTCGCAGAAGTGTTCAAGAAAGGATGGCATTTGAGACCAAGGCGTTGCATTTCATAAGCAAAGCTATCAAGGGTGATTACAATCTCAATGAATTCAGTCTTCATGACAAAACAGGTTTTCTAAAAACTTCTGTGGAACAGAAAGAAAATAAGTTCCAAGAAGATGTGAAACATCAAGAAAGAATTCCAAGGAAAAATGGGATAGTAAAGCCCCCCTCACCTATGCGTGACCCACGTCATCCATCACCCAAGCTGCGGGAACGCAATCCAGAGATGTACTTGGATCTCCCAACTAGATCACTATTGGATCCACTTCTGTCAGAGGAGACTGATCTGAAGTGGCAACCCAACAAGCTCTCTGAGAGCATCATGAAGTGTTTGAATTTCATTTATGTAAGACTGCTCAGAACATCAAGAGCAATGGAATTGGAGAAATCAGGGCCCATTTCAAGGTCTGTGCACTCTTCTTTAAGCTCAAGAAGCTTCAGGGTGGATACTGGGTCAACCCCAAAACCAAGCCTCTTGTTGCAAAAGGAATCTAGGCAGCAAGACCCTTATGGTATCTTTAACACAGAAGACTCCGTTCCAAGGGACATTGGTCCTTACAAGAACCTGGTTATATTCACTTCCAGCTCTATGGATCCCAAGTTTATCTCAAGTCCGTCGTCTATACCATTACTGAGGAAGTTAAGGATCTTGATGAGCAATCTTGAAACAGTTGACTTGAAAAGCCTTACAAACCAACAGAAATTAGCATTCTGGATCAACGTATACAATGCTTGTATCATGCATGGATTTATCCAATATGGAGTGCCATCCACCCCAGAAAAACTACTTGCATTGATGAACAAGGCAACCCTGAATGTAGGAGGCAACATAATAAATGCTCAAGCAATAGAGCATTTCATACTGAGGAAACGAGATATTTCTAATATGAAAGAGGTTCAGCTAAAGGGTGAGTGGGAAGAGAAAGAATCGGTTGTTCGTGAACTTTATGGACTTGAGTTTGTTGATCCTAATGTCACATTTGCTCTGTGTTGTGGAACTCGTTCTTCTCCTGCTGCGAGGATATACACAGGAGATGGAGTAACAAGTGAATTGGAGAAGTCAAAACTGGACTATCTCCAGGCTTCAATTGTGGCTAGTAGCAGCAAAAGAATAGGATTCCCAGAGCTTCTTCTCATAAACATGCTTGATTTTGCGGCGGATGCAGAGTCATTGGTGGAGTGGGTATGTAGCCAGTTACCTACATCAGGCACTCTAAGGAAATCAATGGTGGATTGCTTCAGAGGCCACAATAATAGTGTCAAGCTTTCTACCATTGTTGAAAAGATACCCTATGACTATGAATTCCAGTATTTGTTGACAATATAA 2118 0.4254 MSHSHQHPQPQQRRLLSLCLNQLHEHPPESSFSSSQTHYKTKIPLCLIHPQTSTTPPSTSPLSFFGPKIVSSSPHQHFYFHEPHSPSLRCCFNVSSRRWGAFKLGCTSMDPQVDFSSSLHSPSEIIKKKKITGRQKREELEREVSMLQSLLDQEEKFHEILEMLHNRPNGSAISIPNFLPPKMRELLGELVMVESEIARLESQISQLQAGLKHEQEVTKESKSKTWNQGNLSNSNNHLSTSPIPNPSPIRRSVQERMAFETKALHFISKAIKGDYNLNEFSLHDKTGFLKTSVEQKENKFQEDVKHQERIPRKNGIVKPPSPMRDPRHPSPKLRERNPEMYLDLPTRSLLDPLLSEETDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPISRSVHSSLSSRSFRVDTGSTPKPSLLLQKESRQQDPYGIFNTEDSVPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLETVDLKSLTNQQKLAFWINVYNACIMHGFIQYGVPSTPEKLLALMNKATLNVGGNIINAQAIEHFILRKRDISNMKEVQLKGEWEEKESVVRELYGLEFVDPNVTFALCCGTRSSPAARIYTGDGVTSELEKSKLDYLQASIVASSSKRIGFPELLLINMLDFAADAESLVEWVCSQLPTSGTLRKSMVDCFRGHNNSVKLSTIVEKIPYDYEFQYLLTI 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01328 705 MobiDBLite consensus disorder prediction 222 248 - -
Spst11g01328 705 MobiDBLite consensus disorder prediction 215 249 - -
Spst11g01328 705 Pfam Protein of unknown function, DUF547 491 623 IPR006869 -
Spst11g01328 705 Pfam Leucine-zipper of ternary complex factor MIP1 133 214 IPR025757 -
Spst11g01328 705 Coils Coil 137 157 - -
Spst11g01328 705 Coils Coil 183 217 - -
Spst11g01328 705 MobiDBLite consensus disorder prediction 313 335 - -
Spst11g01328 705 PANTHER EXPRESSED PROTEIN 125 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01328 Spst-Chr11 37776689 37781875 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01328 - - gmx:100809848 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01328 11 37776689 37781875 Spst11g01328 11 37776689 37781875 ECH