Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01319 ATGAAAATGAGGAGTGTTGCAATTTTGATTATGACTATTTTGAGTTTTGGCCAAATTGCAAGAAGTGAGTCACCCATTAGTTGTAGTAGAAAATGTGCTTTAGATTGTTTAGATGTACCCTTTGCATATTCTGCATGCTTTGATGGTTGTACCGCAAAATGCCCCAAGACGCCTGTGGCACTGGATGTCTACAATTGCGTTAGCAGGAACTTTTCCTTCTTTGGGACTGCTGTGTCGTGTTTGGGTTCGCAGCTCGAATTTAATGGAATTGGAGTGCTCGATTTGGGTGACGGTGGCATTGGTGCCATACAGCTGTTGGGCTCCAATTTCAAGATGAGCGATTCTCACTCCGAAAATCATGATGAAGCAACTGTGGTGGGATTTGAAGTTCCAAAATCACCTGATTCCAGTTACAACAATGTCTACCCAGGAAATGAAGATGAGGCAAGGGATCCGCCTATGGTGCCTTCACATTTGCAACACACTTTGCTCAATTATCCTGCTAGTAGAGACACTGCAGGAACTGTTCCATTGCCTCAGAATGTGATTCTAAATCATCTTTACATCGAGAATAGAGAGTCCCCAAGGTCTGTGGTGGCGTTGGGATTCACTCATCGTTTCCGCTCTAAGTATGTTACAGTGGTGCTTTACAAACCAGTCCAAAGAAGGGGAAGTACAGGCATTTAA 687 0.4367 MKMRSVAILIMTILSFGQIARSESPISCSRKCALDCLDVPFAYSACFDGCTAKCPKTPVALDVYNCVSRNFSFFGTAVSCLGSQLEFNGIGVLDLGDGGIGAIQLLGSNFKMSDSHSENHDEATVVGFEVPKSPDSSYNNVYPGNEDEARDPPMVPSHLQHTLLNYPASRDTAGTVPLPQNVILNHLYIENRESPRSVVALGFTHRFRSKYVTVVLYKPVQRRGSTGI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01319 228 SMART AMPKBI_2 131 220 IPR006828 GO:0005515
Spst11g01319 228 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 149 219 IPR006828 GO:0005515
Spst11g01319 228 SUPERFAMILY AMPKBI-like 123 220 IPR037256 -
Spst11g01319 228 Gene3D - 125 220 - -
Spst11g01319 228 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 112 222 IPR043554 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01319 Spst-Chr11 37592823 37599108 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01319 - - gmx:102661902 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01319 11 37592823 37599108 Spst11g01319 11 37592823 37599108 ECH