Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01310 ATGGGGGTAACTTTCTCTCTCACGTTCACCACTTTCCTAGACTCAGTTACGTTGCTAATTGTGTTGTTGGTGTTGCAGAAAAAGAAGACAGGTGGCGGCAACGGGAACAAGGAGAACGAGGACGGCACAACCACCGTCGTTTTAAAGCTAGACTTCCATTGCGACGGTTGCGCTTCCAAAATCACTCGACACCTTCGCGCTTTCCGAGGTGTGGAGACGTTGAAGGCGGAGAGCGGCGCCGGCAAGGTAACGGTCACCGGGAAAGTTGACCCCACGAAGGTGAGGGACAACCTGGCGGAGAAGATGAAGAGGAAGGTGGAAATTGTTTCTCCGCAGCCCAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGATAACAAGGACACCAAAACCAACAACAAAATCCACGACAAGAAAAACAAAGAGGTGGTGACTACCGCTGTTCTGAAGATGGCATTGCATTGCCAGGGTTGCTTGGACAGGATTGGAAGGACCGTGCTGAAAACCAAAGGAGTACAAGAAATGGGTATCGACAAGGAAAAGGAAACGGTGACTGTGAAGGGTACGATGAATGTTAAGGCTCTGGTGGAGAATCTAACGGAGAAGCTGAAGAGGAAGGTTGAGGTGGTCCCTCCAAAGAAAGAGAAGGAGGGTGACAAGGAAGGTGAGAAGGACAAGGAAGGATCAGGGAAGAAGAAGAACAAGAGTGGTGGTGGTGGAGGAGATAATAATGAAGAGGGAGGAGAGAAAATAGATTACAACAGAATGGAGTATTTGCCACAACCTGCTTTTGGATTTGGTTATGGTTATGGTTATGGACAGAGCAATGTTGGTGGCCATAGCTATGTGCCAGTGTACCCGGAGCAGATGCACTTTCACTTGCATGCACCACCACCACAACTTTTCAGTGACGAGAACCCGAATGCTTGTTCTGTCATGTGA 975 0.4903 MGVTFSLTFTTFLDSVTLLIVLLVLQKKKTGGGNGNKENEDGTTTVVLKLDFHCDGCASKITRHLRAFRGVETLKAESGAGKVTVTGKVDPTKVRDNLAEKMKRKVEIVSPQPKKEKEKEKEKEKEKEKEKEKEKDNKDTKTNNKIHDKKNKEVVTTAVLKMALHCQGCLDRIGRTVLKTKGVQEMGIDKEKETVTVKGTMNVKALVENLTEKLKRKVEVVPPKKEKEGDKEGEKDKEGSGKKKNKSGGGGGDNNEEGGEKIDYNRMEYLPQPAFGFGYGYGYGQSNVGGHSYVPVYPEQMHFHLHAPPPQLFSDENPNACSVM 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01310 324 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 28 324 IPR044594 GO:0046872
Spst11g01310 324 MobiDBLite consensus disorder prediction 218 244 - -
Spst11g01310 324 Coils Coil 112 144 - -
Spst11g01310 324 MobiDBLite consensus disorder prediction 94 148 - -
Spst11g01310 324 SUPERFAMILY HMA, heavy metal-associated domain 44 107 IPR036163 GO:0046872
Spst11g01310 324 ProSiteProfiles Heavy-metal-associated domain profile. 155 226 IPR006121 GO:0046872
Spst11g01310 324 Pfam Heavy-metal-associated domain 163 218 IPR006121 GO:0046872
Spst11g01310 324 Pfam Heavy-metal-associated domain 52 104 IPR006121 GO:0046872
Spst11g01310 324 Gene3D - 43 117 - -
Spst11g01310 324 Gene3D - 152 228 - -
Spst11g01310 324 CDD HMA 164 219 IPR006121 GO:0046872
Spst11g01310 324 MobiDBLite consensus disorder prediction 218 260 - -
Spst11g01310 324 ProSiteProfiles Heavy-metal-associated domain profile. 43 114 IPR006121 GO:0046872
Spst11g01310 324 CDD HMA 53 107 IPR006121 GO:0046872
Spst11g01310 324 SUPERFAMILY HMA, heavy metal-associated domain 155 218 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01310 Spst-Chr11 37535499 37536875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01310 - - gmx:100820520 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01310 11 37535499 37536875 Spst11g01310 11 37535499 37536875 ECH