LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst11g01300	ATGGCTTTGGCATCATCACCATCCCTCTCCAAACTCTCTCTAGTGTTGCTCTTCTTCCTGTCACTTTCTTCTTCTCATCCCTCCCATGACCCTACCTACCCACCACAATCACATGCAGAAAGGCTCGTCAGAAGCCTTAACCTATATCCGAAGGACTCAGTTAACATTATAGAAAGTGACCATGCTGGTCATGGTTTTGTCCCTGGTGAGATCGTGGAGAAGAAGTTTTCGTTTCTTGGTGATTCTGGGCCTTCTGTTGAAGACCTTGGTCACCATGCAGGCTACTATTCCCTTCCTCATTCCATATCTGCAAGGATGTTCTACTTTTTCTTTGAATCACGGATCAGCAAGGATGATCCTGTTGTGATATGGTTGACTGGAGGACCAGGGTGTGGAAGTGAAATAGCTTTGTTTTATGAGAATGGTCCTTTTCATATTGCCAATAACATGTCTCTTACATGGAATGATTACGGCTGGGATCAGGCATCAAATATAATATTTGTTGACCAACCTACGGGAACAGGTTTTAGTTACTCTTCTAATGATACTGACATTCGTCAGGATGAAGCCGGGGTTAGCAATGATTTATATGATTTCTTGCAGGAGTTTTTCAAGGCACATCTTGATTTCATTAGCAATGACTTTTACATTTTTGGTGAATCATATGCTGGACACTACGTTCCTGCACTTGCATCCCGGGTTAACCAAGGAAATAAACAAAATCAAGGACTTCATATAAACCTCAAGGGTTTTGCTATTGGTAATGGGTTAACAAACCCTGCAATTCAATACCAAGCATACCCAGATTTTGCATTAGACAAGGGAGTAATTACTAAGACTGAGTATGAAACTCAAGGCGGAGAAAGTTGTGCCGATGCGTTAGATATTTGTGAAAACATTTTGTATCGTATCCTTGTCTTTACTGACAACATTAACTACTATGACATCAGAAAGAAATGTGAGGGATATTTGTGCTACAACTTCACAAACGTGGAAAAGTTGTTAAATGAGCAGAAAGTGAAGCGTGCTTTAGGTGTGAGGGATGACTTGGAGTATGATTTATGCAGTTTAAAAGTTCATGCGGCTATGATGCAAGACTGGATGAGAAACCTGGAAGTGGGGATTCCTGCTCTTCTTGAGGATGGAATCAAGTTGCTAGTGTATGCTGGGGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTACAAGCCATGCAGTGGTCAGGCCAAAAGGGATTTGAGATATCTCCTACAGTGAAATTTGTGGTTGATGGTGCAGAAGCAGGTTCTCTTAATAGCTATGGACCTCTCACTTTTCTCAAGGTGCATGGGGCAGGGCACATGGTCCCTATGGATCAACCAAAAGTTGCACTTCAGATGTTGACAAGCTGGACAGGAGGGAAACTAAATGCATCCTCTTCTGCAAGTTGTGATCTTATGGAGCCTGACAGGTTAAATTCCCCAACGACATTTGAGATGCCATTGGAAGTTTTGGGCCACGAGTTGCAGTTTTCTCAGGATCCCAATTCCAAGCACTTGGGGACTACAGTATGGGATGCATCACTTGTGTTTGCCAAGTTTCTTGAACGGAATTGTAGAAGGGGGAGATTTTCCCCAGCTAAACTTAAAGGAAAACGTGTAATTGAACTAGGAGCTGGCTGTGGTGTTTCTGGTTTTGGAATGGCTTTGCTGGGATGTAATGTTATAGTGACTGACCAAAAGGAGGTTTTGCCATTGTTAGGGAGAAATGTTGAGCGTAATATTTCAAGGGTCATGCAAAAGAATCCTGAGTCATTTGGTTCAATCAAGGTTGCTGAACTTCAGTGGGGAGACGAGAGTCACATTAAGGCTGTGGGTCCTCCTTTTGACTACATAATCGGCACTGATGTTGTGTATGTAGAGCATCTACTGGAACCTCTATTACAGACAATACTTTCTTTATCTGGACATAGGACTACAATTTTGTTGGGCTATGAGATCCGCTCTACAAGTGTCCATGACAAGATGCTTCAGATGTGGAAAAGATACTTTGACGTGAAGACTGTCTCGAAGTCCAAGATGGATGAGACATTTCAACATCCAAGTATTGAACTCTTCATTATGGGATTTAAACATTCAGCAGAGTGCACAGAGAACTCAGGTGAGACAACTGTTGAAAAAGTTGATGTGGAAACTGTTGTGGATGATAAAAGCAGTGAGGGAAGCGTTGTAGCAGAAGAAGGAACTGGTCTCGTTGAAGAAAACGTTGAGGATCACGATAAGTCAATCTCGCAAAATGCTAAGCTTAGTGAATGGGAAGCCAGAAGGTATGGAGCAATGGCTGCAAGGATTTTGCGAGATATAAAAATATCTTGA	2364	0.4226	MALASSPSLSKLSLVLLFFLSLSSSHPSHDPTYPPQSHAERLVRSLNLYPKDSVNIIESDHAGHGFVPGEIVEKKFSFLGDSGPSVEDLGHHAGYYSLPHSISARMFYFFFESRISKDDPVVIWLTGGPGCGSEIALFYENGPFHIANNMSLTWNDYGWDQASNIIFVDQPTGTGFSYSSNDTDIRQDEAGVSNDLYDFLQEFFKAHLDFISNDFYIFGESYAGHYVPALASRVNQGNKQNQGLHINLKGFAIGNGLTNPAIQYQAYPDFALDKGVITKTEYETQGGESCADALDICENILYRILVFTDNINYYDIRKKCEGYLCYNFTNVEKLLNEQKVKRALGVRDDLEYDLCSLKVHAAMMQDWMRNLEVGIPALLEDGIKLLVYAGEEDLICNWLGNSRWVQAMQWSGQKGFEISPTVKFVVDGAEAGSLNSYGPLTFLKVHGAGHMVPMDQPKVALQMLTSWTGGKLNASSSASCDLMEPDRLNSPTTFEMPLEVLGHELQFSQDPNSKHLGTTVWDASLVFAKFLERNCRRGRFSPAKLKGKRVIELGAGCGVSGFGMALLGCNVIVTDQKEVLPLLGRNVERNISRVMQKNPESFGSIKVAELQWGDESHIKAVGPPFDYIIGTDVVYVEHLLEPLLQTILSLSGHRTTILLGYEIRSTSVHDKMLQMWKRYFDVKTVSKSKMDETFQHPSIELFIMGFKHSAECTENSGETTVEKVDVETVVDDKSSEGSVVAEEGTGLVEENVEDHDKSISQNAKLSEWEARRYGAMAARILRDIKIS	787

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst11g01300	787	Gene3D	alpha/beta hydrolase	73	480	IPR029058	-
	Spst11g01300	787	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	85	457	IPR001563	GO:0004185\|GO:0006508
	Spst11g01300	787	ProSitePatterns	Serine carboxypeptidases, serine active site.	217	224	IPR018202	GO:0004185
	Spst11g01300	787	Pfam	Serine carboxypeptidase	88	469	IPR001563	GO:0004185\|GO:0006508
	Spst11g01300	787	SUPERFAMILY	alpha/beta-Hydrolases	89	471	IPR029058	-
	Spst11g01300	787	FunFam	Serine carboxypeptidase 3	106	165	-	-
	Spst11g01300	787	PRINTS	Carboxypeptidase C serine protease (S10) family signature	155	167	IPR001563	GO:0004185\|GO:0006508
	Spst11g01300	787	PRINTS	Carboxypeptidase C serine protease (S10) family signature	203	228	IPR001563	GO:0004185\|GO:0006508
	Spst11g01300	787	PRINTS	Carboxypeptidase C serine protease (S10) family signature	168	178	IPR001563	GO:0004185\|GO:0006508
	Spst11g01300	787	PRINTS	Carboxypeptidase C serine protease (S10) family signature	440	453	IPR001563	GO:0004185\|GO:0006508
	Spst11g01300	787	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	544	659	IPR029063	-
	Spst11g01300	787	Pfam	Lysine methyltransferase	503	667	IPR019410	-
	Spst11g01300	787	ProSitePatterns	Serine carboxypeptidases, histidine active site.	440	457	IPR033124	GO:0004185
	Spst11g01300	787	Gene3D	Vaccinia Virus protein VP39	496	711	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst11g01300	Spst-Chr11	37404125	37412174	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst11g01300	K16298		-	gmx:100798795	720.694

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst11g01300	11	37404125	37412174	Spst11g01300	11	37404125	37412174	ECH