Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01297 ATGGAATTAGGATCATTGCCAACCCTCTCCCATGTCTCTCTGTCTGTTGTGCTGCTCTTCTTCTTCTCACTTTCTTCCTCCTATGCAACTTCTCGCTTCACCCATCACCTTGCTTACCCACCACATTCACAAGCAGAAAAGTTCATTAGAAGCCTTAATCTGTTTCCAAAGGACTCAGCCAATAACAGTGTAAAAGGTGACAATGCTGGTTTTGTTCCAGGAAAGATCGTGGAAAAGAAGTTCTCGTTTTTTGGCGATTCTGGGCCTTCTGTTCAAGACCTTGGTCACCATGCAGGCTACTATTCACTACCTCATTCCAAAGCTGCTAGGATGTTCTACTTTTTCTTTGAATCACGGAACTCTAGAGATGATCCTGTTGTGATATGGTTGACTGGAGGACCAGGGTGTGGAAGTGAAATAGCTTTGTTTTTCGAGAATGGTCCCTTCCATATTGCCAATAACTTGTCTCTTACATGGAATCATTACGGCTGGGACCAGGTATCAAATATTATATTTGTTGACCAACCTATGGGCACAGGTTTTAGTCACTCCTCTGATGATAGTGACACTCCTCATGATGAAGTGGGTGTTGGCAATGATTTATACGACTTCTTACAAGAGTTTTTCAAGCATCATCAAGATTTTGTTCACAATGACTTTTATATCACTGGAGAATCATACGCTGGACACTATGTTCCGGCACTTGCATCCCGGATTAACCAAGGAAATAAAAGAAAACAAGGAATCCATATAAACCTCAAGGGTTTTGCTATTGGTAATGGGATGACAAATCCTGCAATTCAATTCCAAGCATATCCAGATTTTGCATTAGAGAATCGATTAATTAAAAGGGCTGATTACGATGAAATTATCAACTTTGTCCCGGGCTGTGTACAAGACGCTAAACTTTGCCAAACCCAAGGTGGAGAAAGTTGCGTGAATGCGTTAAATGTTTGTGAGAATATTTTCAATAGAATCTTGGTAGATATTGGCTTCAAAATTAATATCTATGACATAAGAAAGAAATGTGAGGCAGGAGGTTTGTGCTATAACTTCAGCAGCTTGGTGACGTTTTTAAACAAGGAGAAAGTGAAAAGTGCTTTAGGTGTGCCTAAGGACTTCAAGTTTAATACATGCAGTACAGCAGTGAAAATAGCTATGCTGCAAGATTGGATGAAAAATCTGGAAGTGGGAATTCCTGCTCTTCTTGAGGATGGAATCAGGATGCTTTTGTATGCAGGGGAAAAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCTATGGAGTGGTCAGGCCAAAAGGGCTTTGGAAGATCTCCTACAGTGAAATTTGTGGTTGATGGTGCAGAAGCAGGGTCTCTTACTAGCTATGGACCTCTCTCTTTCCTCAAGGTACATGAGGCTGGGCACTTGGTCCCCATGGATCAACCAAAAGTTGCACTTCAGATGTTGAAAACCTGGATGGGAGGAAAACTGCACTAG 1494 0.4157 MELGSLPTLSHVSLSVVLLFFFSLSSSYATSRFTHHLAYPPHSQAEKFIRSLNLFPKDSANNSVKGDNAGFVPGKIVEKKFSFFGDSGPSVQDLGHHAGYYSLPHSKAARMFYFFFESRNSRDDPVVIWLTGGPGCGSEIALFFENGPFHIANNLSLTWNHYGWDQVSNIIFVDQPMGTGFSHSSDDSDTPHDEVGVGNDLYDFLQEFFKHHQDFVHNDFYITGESYAGHYVPALASRINQGNKRKQGIHINLKGFAIGNGMTNPAIQFQAYPDFALENRLIKRADYDEIINFVPGCVQDAKLCQTQGGESCVNALNVCENIFNRILVDIGFKINIYDIRKKCEAGGLCYNFSSLVTFLNKEKVKSALGVPKDFKFNTCSTAVKIAMLQDWMKNLEVGIPALLEDGIRMLLYAGEKDLICNWLGNSRWVHAMEWSGQKGFGRSPTVKFVVDGAEAGSLTSYGPLSFLKVHEAGHLVPMDQPKVALQMLKTWMGGKLH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01297 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Spst11g01297 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Spst11g01297 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Spst11g01297 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Spst11g01297 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 90 481 IPR001563 GO:0004185|GO:0006508
Spst11g01297 497 Gene3D alpha/beta hydrolase 77 496 IPR029058 -
Spst11g01297 497 Pfam Serine carboxypeptidase 93 493 IPR001563 GO:0004185|GO:0006508
Spst11g01297 497 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Spst11g01297 497 FunFam Carboxypeptidase 84 497 - -
Spst11g01297 497 SUPERFAMILY alpha/beta-Hydrolases 93 496 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01297 Spst-Chr11 37393983 37396379 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01297 K16298 - gmx:100798795 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01297 11 37393983 37396379 Spst11g01297 11 37393983 37396379 ECH