Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01294 ATGGCTCTGCACAAAACTCCCCCAAATAGCAGGGGGTACTATGTTAAGATGAAGCTCCTTCACAAACATGGCAGGCCTCATCACCAGCAAGAAAAAAACTGCTTTCACAAATACTACAAATGGGTCCTCTGGCTTTCTCTTTCCCTTTATTTCTTTACTTCCTACCTCATCAGCAACAACAACCACACCAAACAACCATCTCACGACAAAACAACCCATGTCTCGAGAACCCTTATTGAATCAAACAACACAGCTCCTCCGCAATCTTTAAACTCTCTAGGGTCCCTGAAAAACTTGAAGGTGTTTGTGTACGATCTTCCTCCGAAGTACAACACGGATTGGTTATCGAACGAGAGGTGCAGCAAACATTTGTTTGCGTCAGAGGTTGCCATTCACAGGGCTTTGTTGACCAGCGAGGTGCGCACGTTTGACCCTTACGAAGCTGACTTTTTCTTCGTCCCCGTTTACGTCTCTTGCAACTTCAGCACCGTCAACGGCTTCCCCGCGATTGGTCACGCGCGCTCCCTCATCGCGTCTGCGGTCAACCTCCTTTCCTCGGAGTACCCCTTCTGGAACCGGAGCAGGGGCTCCGACCATGTCTTTGTCGCCTCGCATGATTTCGGCTCGTGTTTCCACACGCTGGAGGACGTGGCGATGGCTGATGGCGTGCCAGAAATTATGAGAAACTCGATCGTGTTGCAGACGTTTGGCGTTGTGTACGATCACCCTTGCCAGAAGGTTGAGCACGTAGTGATTCCGCCGTACGTTTCGCCGGGAACCGTACGGGAGACGATGGAAAACTCTGCGGTGAACGGACGGCGAGATATTTGGGTTTTCTTCCGAGGGAAGATGGAACTTCATCCCAAGAACGTTAGTGGACGATTTTACAGCAAGAAAGTGAGGACTATGATATGGCGAAAGTTCAACGGTGACCGGAGGTTTTACCTGCAGAGACACAGGTTTGCCGGTTACCAGTCGGAGATTGCACGTTCGGTGTTTTGTCTGTGCCCATTGGGGTGGGCCCCGTGGAGTCCGAGGCTGGTAGAGTCCGTTGCATTGGGTTGCGTGCCAGTAGTTATAGCGGACGGTATCCGGTTGCCGTTTCTCTCCGCCGTGAAGTGGTCGGAGATATCGATTACGGTGGCGGAGAGTGACGTGGGGAGGCTGGCGGAGATACTCGAGCGCGTGGCGGCGACGAACCTGAGCACGATTCAAAAGAAGCTGTGGGACCCAGCGACAAGGAGGGCACTACTTTTTAACAGCCAGGTTGAGGAAGGGGATGCCACGTGGCAGGTGCTACGTGCTTTGAGCGAAAAGATTGATAGGTCCTATAGGGGTTCAAGGGTTTCACGCCAATTAGATTTTGACACGTAA 1374 0.5197 MALHKTPPNSRGYYVKMKLLHKHGRPHHQQEKNCFHKYYKWVLWLSLSLYFFTSYLISNNNHTKQPSHDKTTHVSRTLIESNNTAPPQSLNSLGSLKNLKVFVYDLPPKYNTDWLSNERCSKHLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHARSLIASAVNLLSSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIMRNSIVLQTFGVVYDHPCQKVEHVVIPPYVSPGTVRETMENSAVNGRRDIWVFFRGKMELHPKNVSGRFYSKKVRTMIWRKFNGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFLSAVKWSEISITVAESDVGRLAEILERVAATNLSTIQKKLWDPATRRALLFNSQVEEGDATWQVLRALSEKIDRSYRGSRVSRQLDFDT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01294 457 Pfam Exostosin family 97 395 IPR040911 -
Spst11g01294 457 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 76 415 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01294 Spst-Chr11 37363432 37365341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01294 K20889 - gmx:100782077 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00503 5 3968899 3970581 Spst11g01294 11 37363432 37365341 PCT