Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01275 ATGGCACTCCCACACTCCATCTCCGCGTTAGCAACCACACTCACGCTTTCCTCCCCAATAAGCAAACCCAACAACAAAGTGAATTCCTTTCCCTTATTCTCTAATCAGGGTACGCAATTTTTCACTAAACAAACGCGACCCAGAAGCGGAAGAGGCCTTTTGATTACCCCTGCACCCGTTGCTGCGCCACCTTCAACGGTTGAAACCGATCAATCGTTCCCTGAAACCGAAAAAGGGGAGACTGAGGAAGAGTTTAACGAGGAGAGCTCTTCCTCTAAGTTCTCTTGGAGGGATCACTGGTACCCTGTTTCTTTAATCGAGGATCTGAACCCTCTCTTGCCCACTCCGTTTCAGCTTCTGGGTCGTGAAATCGTGCTCTGGTACGACAAGTCCATTTCTCAATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTATCTGAAGGAAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGATGGTCTTTTGATGGTTGTGGATCATGTGTTAAGATTCCTCAGGCTGCATCTGAAGGCCCAGAAGCACGTGCTGTTCGATCTCCTAAAGCATGTGCCACTAGGTTCCCGACTCTGGTGTCTCAGGGATTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAGAGCAAATGCCTCCAAGCCTCCAATGTTGCCCGATGACTATGTAAAACCGGAGTTTGCCACGGTCAACATTCAGCGTGATCTGTTCTATGGTTATGATACACTCATGGAGAATGTCTCTGATCCTTCTCACATTGATTTTGCTCATCACAAGGTCACAGGAAGGAGAGACAGAGCCAAGCCTCTGCCATTCAAGATGGATTCTCGTGGTTCATGGGGCTTTTCTGGAGCTAATGAAGGGAACCCTAGGATCAGTGCCAAATTTGTTGCACCATGTTATTATATGAACAAGATTGAGATTGATACCAAACTCCCTGTAGTTGGTGACCAGAAATGGGTTGTATGGATATGTTCCTTCAATGTCCCAATGGCACCTGGTAAGACTCGCTCCATTGTTTGCAGTGCTAGAAACTTCTTCCAGTTCTCAGTGCCAGGGCCTGCCTGGTGGCAAGTCGTTCCTAGATGGTATGAGCATTGGACTTCGAACAAGGTATATGATGGAGACATGATAGTCCTTCAAGGCCAAGAGAAAATCTTCCTTTCACAAACCAAGGAAGGAGGTGACATTAACAAACAGTACACCAACATCACCTTCACACCAACACAGGCAGATCGCTTTGTCTTGGCATTTCGAAACTGGCTGAGGCGACATGGCAATGGCCAACCAGAATGGTTTGGCAACAGCAGCGACCAGCCATTGCCATCAACTATTTTATCCAAACGTCAGATGTTGGATAGATTTGAACAGCATACTCTCAAGTGTTCATCATGTAAAGGAGCTTATGAGGGATTCCAAAGATGGCAAAAAGTCTTGATTGGTGCAACAGTTGTGTTTTGTGCAACATCAGGGATTCCAGCAGATACCCAGTTGCGTGTACTTTTGGCTGGACTTGCAATTGTAAGCGCAGCCTTAGCTTTTGCCCTAAACCAACTCCAAAAGAATTTTGAATTTGTCGATTACGTGCATGCAGAAATCGAATAA 1641 0.4631 MALPHSISALATTLTLSSPISKPNNKVNSFPLFSNQGTQFFTKQTRPRSGRGLLITPAPVAAPPSTVETDQSFPETEKGETEEEFNEESSSSKFSWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAVRSPKACATRFPTLVSQGLLFVWPDENGWERANASKPPMLPDDYVKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPRISAKFVAPCYYMNKIEIDTKLPVVGDQKWVVWICSFNVPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSQTKEGGDINKQYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTILSKRQMLDRFEQHTLKCSSCKGAYEGFQRWQKVLIGATVVFCATSGIPADTQLRVLLAGLAIVSAALAFALNQLQKNFEFVDYVHAEIE 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01275 546 MobiDBLite consensus disorder prediction 56 90 - -
Spst11g01275 546 Pfam Rieske [2Fe-2S] domain 99 182 IPR017941 GO:0051537
Spst11g01275 546 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 100 212 IPR017941 GO:0051537
Spst11g01275 546 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 21 492 - -
Spst11g01275 546 SUPERFAMILY ISP domain 93 218 IPR036922 GO:0051537
Spst11g01275 546 SUPERFAMILY Bet v1-like 207 442 - -
Spst11g01275 546 Gene3D - 238 441 - -
Spst11g01275 546 CDD Rieske_RO_Alpha_PaO 93 223 - -
Spst11g01275 546 MobiDBLite consensus disorder prediction 73 90 - -
Spst11g01275 546 Gene3D - 95 237 IPR036922 GO:0051537
Spst11g01275 546 Pfam Pheophorbide a oxygenase 308 403 IPR013626 GO:0010277
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01275 Spst-Chr11 37232414 37237042 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01275 K13071 - gmx:100812162 1028.85