Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01264 ATGGAAAAAGTCCCTCGTTTACTATCCATTTTCCTGTTCATAGCTTTGCTGTTTCATGGGGGAAAGGTGTTAGCTTTCAAAACCCAAGATGGATCAGAGGAATGGGGATACGTTCAAGTTAGACCTAAAGCACACATGTTTTGGTGGCTTTACAGAAGTCCCTATAGAGTGGAAGATCCCTCCAAGCCATGGCCACTTGTTCTCTGGTTGCAAGGAGGACCTGGTGCTTCAGGAGTTGGGATTGGAAATTTTGAGGAGGTTGGGCCTTTGGACACAGACTTGAAGCCACGGAATTCCACATGGTTGAAAAAAGCAGATCTCTTGTTTGTGGACAATCCAGTTGGAACCGGGTACAGTTTTGTGGAGGACAAAAAACTCTTTGTCAAAACAGATAATGAAGCGGCCACCGACTTGACTACATTGCTGATTGAATTGTTCAATGGGAATGAGAAACTGCAGAAGAGTCCTCTGTTCATAGTGGCAGAGTCATATGGTGGCAAATTTGCTGTCACTCTCGGGTTATCTGCTCTGAAAGCTATAGAAGATGGGAAATTGAAGCTTAGTCTTGGAGGTGTAGCATTAGGAGACAGTTGGATCTCCCCTGAAGATTTTGTGTTCTCATGGGGTCCTCTCCTTAAAGACCTCTCACGGCTTGACGATGGTGGACTGCAAAAATCAAACAGTATAGCTGAGAGGATCAAGCAGCAAATTGAGGATGGTAAATTTGTTGAAGCCACCGACTCATGGAGTGAACTTGAGTCTGTGATTTCCGTCAGCAGCAACCATGTGGACTTCTACAATTTATTGGAGGATGCAGGAAGTGATGATGTTGTAACATTGGAGTTGGGGTTATACAAAAAAGTATCAATGAAGAGGTACTCCAGGTATCTCAGTTCCTTGAGGTCAAGGTCAATATCTCCTGGTGGAGATGATGATCTTGACAAGTTACTGAACGGAGTCATAAAGAAAAAGTTAAAGATCATCCCTGAGAATGTCACATGGGGAGGGCAATCTGGTGATGTTTTCGATAACCTTGCAGGTGATTTTATGAAACCAAGAATTGATGAGGTTGATGACCTGCTGGCAAAAGGGGTCAATGTGACAGTGTACAATGGACAAATTGATCTGATTTGTTCAACCAAAGGGACTGATGCTTGGGTTCATAAACTGAAGTGGGAAGGGCTTAAAAATTTCTTGGCAAAAGATAGAACACCCCTCTACTGTGGAAGTGACAAATCAAAAACGAAAGGCTTTGTTAGATCACATAAAAATCTATACTTCTATTGGATCCTCAAAGCTGGCCATTTTGTACCCACTGATCAACCATGTGTGGCTCTAGACATGGTGGGTGCAATTACACAGTCACCTGCCACTTGA 1377 0.4328 MEKVPRLLSIFLFIALLFHGGKVLAFKTQDGSEEWGYVQVRPKAHMFWWLYRSPYRVEDPSKPWPLVLWLQGGPGASGVGIGNFEEVGPLDTDLKPRNSTWLKKADLLFVDNPVGTGYSFVEDKKLFVKTDNEAATDLTTLLIELFNGNEKLQKSPLFIVAESYGGKFAVTLGLSALKAIEDGKLKLSLGGVALGDSWISPEDFVFSWGPLLKDLSRLDDGGLQKSNSIAERIKQQIEDGKFVEATDSWSELESVISVSSNHVDFYNLLEDAGSDDVVTLELGLYKKVSMKRYSRYLSSLRSRSISPGGDDDLDKLLNGVIKKKLKIIPENVTWGGQSGDVFDNLAGDFMKPRIDEVDDLLAKGVNVTVYNGQIDLICSTKGTDAWVHKLKWEGLKNFLAKDRTPLYCGSDKSKTKGFVRSHKNLYFYWILKAGHFVPTDQPCVALDMVGAITQSPAT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01264 458 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Spst11g01264 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 442 IPR001563 GO:0004185|GO:0006508
Spst11g01264 458 Gene3D alpha/beta hydrolase 18 457 IPR029058 -
Spst11g01264 458 FunFam Carboxypeptidase 18 457 - -
Spst11g01264 458 SUPERFAMILY alpha/beta-Hydrolases 32 455 IPR029058 -
Spst11g01264 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Spst11g01264 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Spst11g01264 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Spst11g01264 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Spst11g01264 458 Pfam Serine carboxypeptidase 30 451 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01264 Spst-Chr11 37134861 37140018 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01264 K09646 - gmx:100787940 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01264 11 37134861 37140018 Spst11g01264 11 37134861 37140018 ECH