Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01261 ATGCAAACAATTGAAGGTGTGGATTGGAACCGCCTTCTCAAGGTGATGGTGGTGAAACAAATGGTAGTTGATGCATATGCATTAATAGGGGATACTGCTGGTCTTGCTGAGAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTATTAAAGGCCATTGTGCATGAGGATGAGGAGGGACTTTTGCAAAATAGTAGGTTCACTTACAGCGATTTATGCCTTAGAATACCTGATTCAAAGTTCAGGCAATGCTTATTACGAACCCTTGCTGTTCTATTTGACCTTATGTGTTCATACCATGAAATTATGGATTTCCAGCTAGAAAGAAAGGACACAGTACAAAATTCAAATAAGTGCAATGAAGAGATTTCCTGTAGTCCAGGTGAGGCTCAGGAAGTTGATTCAGATGTAAGAGCCTGCAACAATTCTTTGTCCAGTTCTGGAGATATATTACATGTCTCATCTTCTAGGGAGGAATCTGCATCAATGAGCTCACTCACTGAAACTAGTGGTTCACCATTCGGTGATTCTCATGATCAAATTAAGGAGGCTGGAAAGGAGGACAGTGCAACATCAAGCTTCGAATCCCCTTGGTACCATCTTCGCAAAGAAGCTATAACATTTGTGTCGCAGATCCTTCAAAGAGGACGAAGGAATTTGTGGCATCTCACTGCAAGTCGTGTATCGGTTTTGCTTTCTTCTGCTGCAGTCTTTACCGCTAGCATTCATCAATTCTTGAAAAATTATGAAGAACTAAGTGTCTTTATTTTGACTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAATTTAGGCAGAAGTTAAAGGCACTAAAAATGGTTTTGGAGAAGGAGACTTGGCAAAGATTACCTCTAGATACAGTACAAATGATCAGTTTTGCAGGACTTATTGGTGATGGAGCACCCTTGATTTCTTTATCCACTGGTAAATCAATTAACATCAGTGCAATCCATTCCCATAAATCAGTGAATATGGTTCATACTGGTGCGAGGAAAAATGGGTTCTCTCACTGGATCAAAAGCGGAAACCCTTTCATGCAAAAATTACCAACCTGTAATGAAGGTCATGGTTACTCCCAACCAAATGGATCTGCTCGTGGTGAATCTGATGGAAGTTGGGCCAAATACTTTCATGATGATAGAACACCTAGAAAGAATGATTCCAATCAAATGAATGGTGCCAATTCTGTTTCAGAAGATGAAGATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAATTACCAAGTCGAAGTTCTAAACATCATTCAAGAAATCTTTCTTCTCATGGTAATGATGAAGAGAATACAACACAAACTGGATCTTCTCTCTGTCTTTTAAAGGAATATGCCAATTATCGCTTGAGAACAGCTTTATCCAGAGTTAACCAAGATTGTGAAGAGTGGATTAAGTCTCAATCGTCTTCACCAACATCTTTGACCTCATCATTTGTACATACTGAGTTGACACCTATAAACCCTCCCAATACGAATTTTGGCTCAGGGACTTCTTTGGGTCTCAAGTACAACCCCTCACTTAAGGAGGACTGGAACCCTGACTCAGGGATGGGTGAAGTGGTCTGGATCATCGCCCCAACAGACTGTTTAGATGAGGGTGGTGTACAAGAAATACACCACTGGGCTTGGGTTCTTCTTTTCCTTTGTGCCCAAACCTTTCCTGACCCTGAATTTCCTAACTCGCAGAACACTCTTCCCTCCCTATTCACTTTTGCTACTTCACTCCCTTCCCTTTTGCTTATCTGTTGCTGTGTGGTTGCATCTATTGTTTCTTCTCTGGTTGTGCTGTGTGGTTGTTGGATTGTTAAATTTTACAAGATCCATCTTGGGATCCAATTGAAAGGTACGGGACTTGTGCCCCACATGGAAGGATGGGATTCTAGTGTGGGTTTATTAGGGTTTAGTTTAGCTCTCCAACTTGTGGTGTGGTTCTAA 1989 0.4103 MQTIEGVDWNRLLKVMVVKQMVVDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKAIVHEDEEGLLQNSRFTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFQLERKDTVQNSNKCNEEISCSPGEAQEVDSDVRACNNSLSSSGDILHVSSSREESASMSSLTETSGSPFGDSHDQIKEAGKEDSATSSFESPWYHLRKEAITFVSQILQRGRRNLWHLTASRVSVLLSSAAVFTASIHQFLKNYEELSVFILTGEAFCGIEAVEFRQKLKALKMVLEKETWQRLPLDTVQMISFAGLIGDGAPLISLSTGKSINISAIHSHKSVNMVHTGARKNGFSHWIKSGNPFMQKLPTCNEGHGYSQPNGSARGESDGSWAKYFHDDRTPRKNDSNQMNGANSVSEDEDEDLLADFIDEDSQLPSRSSKHHSRNLSSHGNDEENTTQTGSSLCLLKEYANYRLRTALSRVNQDCEEWIKSQSSSPTSLTSSFVHTELTPINPPNTNFGSGTSLGLKYNPSLKEDWNPDSGMGEVVWIIAPTDCLDEGGVQEIHHWAWVLLFLCAQTFPDPEFPNSQNTLPSLFTFATSLPSLLLICCCVVASIVSSLVVLCGCWIVKFYKIHLGIQLKGTGLVPHMEGWDSSVGLLGFSLALQLVVWF 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01261 662 PANTHER UNCHARACTERIZED 21 464 IPR040047 GO:0032456|GO:0042147|GO:1990745
Spst11g01261 662 MobiDBLite consensus disorder prediction 383 397 - -
Spst11g01261 662 MobiDBLite consensus disorder prediction 361 412 - -
Spst11g01261 662 MobiDBLite consensus disorder prediction 424 453 - -
Spst11g01261 662 MobiDBLite consensus disorder prediction 364 378 - -
Spst11g01261 662 Pfam Vacuolar-sorting protein 54, of GARP complex 20 110 IPR019515 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01261 K23288 - gmx:100803274 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01261 11 37110258 37115859 Spst11g01261 11 37110258 37115859 ECH