Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01243 ATGCAGAGAAAGGGTGTGTCGTATTCCTCCAAATATCAAAAGGCGTGTATAAAAGTAACATCACTGAAGATTGACGCTGCTTTTCTGCAAAATCACTGCGAGGTTCTGTGTGCTATATGCAGAGGCTGTTCCATATTCTGCTTTCGATCAATCTATTCTTTATTCAGAAGAGAGAGCATGGGTACTCTGCTTGCAGATGAAAAATCAGAAAATCCAAATAATGGTGTAGAACAACTTCACCACCAAAATGATGCTGATGCAGGAGCCCTCTTTGTCCTCAAATCCAAAGCTTTCCATCTTCACAATAAGTTCAATAGCAACGTCAACACCACCGTCGAAAAGAACGTCATTGGAGAAAAGTCGCGTTCAGTGATTTCATGGTTTCATCGTTTGGATTTGGGAGCCGACTTGGATGAAGAAAAGGCCGTAGGAAATTGCGTGGTTCTTGAACACCACGCCCAGATGGGTAAGCGGCAGCTACGCTTCAGAGACATGGCTTCCGATATTTTAGGTCCACGGTGGGGTCGTTATTTTGTTGGGCCAATTCAGTTTGCTGTTTGTTACGGTGCTGTTGTAGCTTGCACTCTCTTAGGAGGACAATGCATGAAGGCAATTTACTTGCTGTCTAATCCAAACGGGACCATGAAGCTTTACGAGTTTGTGATCATATTTGGATGCTTCATGCTAATTTTGGCTCAAATCCCATCTTTCCACTCATTGAGGCACATTAATCTAGTCTCTTTGATTCTCTGCTTAGCCTATAGTGCTGCTGCTACTGCTGGTTCCATATACATTGGAGAATCATCCAAAGGACCAGAAAAGGACTACTCTCTGAAAGGTGACACTGAGAATCGCTTATTTGGAATGTTCAATGCAATTGCCATCATTGCCACGACCTATGGAAATGGAATCATTCCAGAAATTCAGGCAACACTAGCACCACCAGTAAAAGGGAAGATGTTCAAGGGACTATGTATTTGCTATCTTGTTCTTATAGTCACTTTCTTTAGCGTATCTGTGTCTGGTTATTGGGCATTTGGCAATGAATCTGAAGGCCTCATCTTAAGCAATTTTGTGGACAATGGGCGTCCTCTGGTGCCCAAATGGTTCATTTACATGACCAACATTTTCACCATAGCACAATTATCAGCAGTTGGTGTGGTTTATTTGCAACCAACAAATGAAGTGCTGGAGCAAACATTTGGAGACCCAAAAAGCCCAGAGTTCTCCAATCGCAATGTAATCCCCAGAGTGATTTCTAGATCACTAGCTATTACTATTGCAACCACTATTGCAGCCATGCTTCCATTTTTTGGAGACATAAACTCTCTTATTGGAGCTTTTGGCTTTATCCCTCTTGATTTCATCTTGCCAGTGATTTTCTACAATTTCACATTTAAGCCATCTAAGCGAAGCCCCATTTTCTGGTTGAATGTAACTATTGCTGTGGCATTCTCTGCATTGGGAGCTATAGCAGCAGTTGCAGCAGTTAGACAGATAGTTCTTGATGCCAAAAATTATCGATTATTTGCCAATGTATGA 1542 0.4196 MQRKGVSYSSKYQKACIKVTSLKIDAAFLQNHCEVLCAICRGCSIFCFRSIYSLFRRESMGTLLADEKSENPNNGVEQLHHQNDADAGALFVLKSKAFHLHNKFNSNVNTTVEKNVIGEKSRSVISWFHRLDLGADLDEEKAVGNCVVLEHHAQMGKRQLRFRDMASDILGPRWGRYFVGPIQFAVCYGAVVACTLLGGQCMKAIYLLSNPNGTMKLYEFVIIFGCFMLILAQIPSFHSLRHINLVSLILCLAYSAAATAGSIYIGESSKGPEKDYSLKGDTENRLFGMFNAIAIIATTYGNGIIPEIQATLAPPVKGKMFKGLCICYLVLIVTFFSVSVSGYWAFGNESEGLILSNFVDNGRPLVPKWFIYMTNIFTIAQLSAVGVVYLQPTNEVLEQTFGDPKSPEFSNRNVIPRVISRSLAITIATTIAAMLPFFGDINSLIGAFGFIPLDFILPVIFYNFTFKPSKRSPIFWLNVTIAVAFSALGAIAAVAAVRQIVLDAKNYRLFANV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01243 513 Pfam Transmembrane amino acid transporter protein 155 497 IPR013057 -
Spst11g01243 513 PANTHER OS05G0424000 PROTEIN-RELATED 149 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01243 Spst-Chr11 36862613 36868449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01243 185 513 Organic Solute Cotransporters AT1G08230 66.767 9.32e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01243 - - gmx:100791114 709.138