Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01233 ATGTTTTTGGTGGTAAGACCATGTGGTTCTTCTTCTGCGCGTATTCATCATCTTCACCCCACTCCCACATCGCACCGCAGCAGAAACGTCGTCGTTAGATGCTCCATCAGCAGCGTGCAGGAGAAGAAAGAGAGAGCCGAATTGGATTCGGCGCTGCAGTCTTCGCTGGCATTCCCGCCTATCAGGGCGGCGAAGAGGGTAGTTCTGGTGAGGCACGGGCAGAGCACGTGGAACGCGGAGGGGAGGATCCAAGGAAGCTCCAATTTCTCCGTGCTGACGAAGAAGGGGGAGTCTCAGGCTGAGACTTCACGCCAAATGCTCATAGACGACCACTTCGATGCCTGCTTTGCCAGTCCTTTGGCTCGATCCAAGAGAACTGCTGAAATAATCTGGGGACCTCGTCAGGAACCCATCATTCTGGACTTTGATTTGAGGGAAATCGATTTGTACTCCTTTCAAGGTCTGCTGAAGCATGAGGGAAAAGCAAAATTTGGTTCTGCTTTTCGTCAATGGCAGGTGGATGCTGTGAATTTCATCATTGATGGTCATTATCCTGTTAGAGAGTTGTGGGAACGTGCTAGAAGCTGCTGGACTAAAATCTTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCCACAGCAATTGGTCTGGGGGCCGAGTATTTCAGAACATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTAGATTTCATCCCAAGATCTGAGGGTGGATCTCCACGTATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCGCCTATTGCTGGTGGGAAATCTGGTGGTAGAGAGACAAGTAAGCGGATCATACTTGTTTGTAATGGATCAACGCAAGGAAATACAGAGGAGGGTTTTCCTTTTGGTGGTGACCAACCATTAAACATGCTTGGTGTCATACAGTCACAGAAGTCTGCAGAGCTACTACTTGATTTGAAAGTGAATTCCATAATTAGTAGTTCTAACAAAGCTTGTGTTGGGACAGCCACTGTCATCTCCCAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCTCGATATGTTGAGATGAAACAGATGGCGAGCCTTGATGTTGAAACTATCTTCAAACAATCTGAAATGGCAAGTAATAATATATCCAATATTCCGCAATTTCAACCTGGTTGGTTAAATAGAGTTGATGATGGATTGAGAACAACATTATGGGATCAATCTGGAACAGCCTGGCGATATCTGTTGGATGAAATATCTGATGAATCTAAGCCAGAGGAAGTTATAGTTGCAGTTGGTCATCCTGCAATCCACATAGCACTAATGGGGCACTGCCTTAATTTGACCAAAGAATGGTTGGGGTCATTTCATCTTGATGCAGGGAGCGTTAGTGTTCTTGACTTCCCTGATGGAGCCAAGGGAAAAGGTGTCATCAGGTGCATAAATTATACTGCACATTTGGGGAGATGGTCCATACCTATCACAAGATCAACAGAAGATGGTGAAGAGTTTTAA 1539 0.4613 MFLVVRPCGSSSARIHHLHPTPTSHRSRNVVVRCSISSVQEKKERAELDSALQSSLAFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDHFDACFASPLARSKRTAEIIWGPRQEPIILDFDLREIDLYSFQGLLKHEGKAKFGSAFRQWQVDAVNFIIDGHYPVRELWERARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGAEYFRTLLQSNCGVSVLDFIPRSEGGSPRICLNRLNQTPGSPIAGGKSGGRETSKRIILVCNGSTQGNTEEGFPFGGDQPLNMLGVIQSQKSAELLLDLKVNSIISSSNKACVGTATVISQVQEAADCLGADCVPRYVEMKQMASLDVETIFKQSEMASNNISNIPQFQPGWLNRVDDGLRTTLWDQSGTAWRYLLDEISDESKPEEVIVAVGHPAIHIALMGHCLNLTKEWLGSFHLDAGSVSVLDFPDGAKGKGVIRCINYTAHLGRWSIPITRSTEDGEEF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01233 512 SUPERFAMILY Phosphoglycerate mutase-like 65 256 IPR029033 -
Spst11g01233 512 FunFam Phosphoglycerate mutase 65 269 - -
Spst11g01233 512 Gene3D - 277 499 IPR029033 -
Spst11g01233 512 SMART PGAM_5 284 449 IPR013078 -
Spst11g01233 512 SMART PGAM_5 66 220 IPR013078 -
Spst11g01233 512 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 276 499 - -
Spst11g01233 512 Pfam Histidine phosphatase superfamily (branch 1) 67 249 IPR013078 -
Spst11g01233 512 Pfam Histidine phosphatase superfamily (branch 1) 285 480 IPR013078 -
Spst11g01233 512 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 280 480 - -
Spst11g01233 512 CDD HP_PGM_like 66 247 IPR013078 -
Spst11g01233 512 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 69 78 IPR001345 GO:0003824
Spst11g01233 512 Gene3D - 65 267 IPR029033 -
Spst11g01233 512 SUPERFAMILY Phosphoglycerate mutase-like 282 500 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01233 Spst-Chr11 36702671 36707405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01233 K22200 - gmx:100798495 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01233 11 36702671 36707405 Spst11g01233 11 36702671 36707405 ECH