Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01213 ATGTGGGGTGAAGATTTTGTCTCCTTCGTATCTGAGAAAGTGTTGGCTGTTGCTTGCGATGTTTCTGTTGAGAACTTGGGAGTTAAAGACATAAAGCTGAGGGAAAATTTGTGGGAAGAGACAGACATCATAGTAAATGCTGCTGCTACGACCAAGTTTAATGAGAGATTGGATGTTGCAATAGGGATTAATACAATGGGAGCTCTTAATGTTCTGAACTTCGCCAAGAACTGTAGTAAATTACAAATTCTTCTCCATATTTCTACTGGTACACAACTATGCATGGATACTATACAATTCGTATTCGGTTAA 312 0.3846 MWGEDFVSFVSEKVLAVACDVSVENLGVKDIKLRENLWEETDIIVNAAATTKFNERLDVAIGINTMGALNVLNFAKNCSKLQILLHISTGTQLCMDTIQFVFG 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01213 103 Pfam Male sterility protein 8 91 IPR013120 -
Spst11g01213 103 Gene3D - 2 94 - -
Spst11g01213 103 PANTHER MALE STERILITY PROTEIN 2-RELATED 3 89 IPR026055 GO:0080019
Spst11g01213 103 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 91 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01213 Spst-Chr11 36435854 36436300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01213 4 90 Acyl Lipid Metabolism Gene Families AT3G44540 56.322 5.57e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01213 K13356 - gmx:100793736 139.813