Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01204 ATGCATAAGGTCACAGAAGAAAAAGATGGATCTGAAACCGAAACCCTCAAACCAATTGTCGATCCGTTTCCTTTTCCACAGTTAGCTACCGTCAAACCTAATTTCTTCATCAAGAGTCATCTTCCAATGAAACGCACCCTTCGGCCTCTCTTCGCGCTCCTCCTTCTCCTCGTCTTCGCCGCCACGCTCATCTCACGCGCCGTCCTCCGCCGCGGCATCCTCTCCATCGAGCTCGAGTACCGCGTGCGGATCCACCACCCATCCCCTCCTCAGCTTAACGCGACACTCCTCCACCACGCTGCTGTTGAAATCGGCGAGGAGAAGTTCAAGCAGGAGATCCAGAACCTCCTCGATGGAAACTTTGGAAGCCACGCGCGCCACCGCACTTTCGTCTCGTGGCGTAGATTCATTCACCACGACAGCGGCGGCGGAGCCGCCCCCAATCTCCCGGCGACGCTCCGGTCACCGCTCTTCTACCGGTACTGGCTCGACTTCCGGAAGGTTCTCCACGATTGGTTCAGGAAGCGACGATTCCAACCCGGTATCATGTCCGAGTTGACTCGGTCAATTAAGCTTCCAATTGATTCACATAGAAAAGTAGTAACCAAAAACAAAAATAAATATGCTTCTTGTGCTGTTGTTGGGAACAGCGGGATTTTGCTGAATAGGGATTATGGAAGTGAAATTGATGCACATGAGGTTGTGATAAGGTTGAACAACGCTAGGGTTGATCACTTTGAGACCAAGGTCGGGAAGAAAACTAGCATTTCATTTATGAACAGTAACATTCTGCATTTGTGTGCTAGAAGGGCTGGGTGTTTTTGTCACCCTTATGGTGACCATGTTCCGATTGTAATGTACATCTGCCAAGCCGTGCACTTCTTGGATTACACTGTGTGCAATGCTTCTCACAAGGCTCCTTTATTGGTCACTGATCCTAGGTTTGATGTGTTATGTGCGAGGATTGTGAAGTATTATTCGTTGAAGAGGTTTGTGGAGGAGACTGGGAAGGGTTTGGAGAAGTGGGGTGAGGCTCATGATGGGGCACTTTTTCATTACTCTTCTGGGATGCAGGCTGTGATGCTGGCTTTGGGTGTTTGTGATAGGGTTAGCATTTTTGGGTTTGGGAAATCGGCTTCAGCTAAGCATCATTACCACACTAACCAGAAGGCTGAGCTTCATTTGCACGATTATGAGGCTGAATATGCGTTTTATAGGGACCTTGTGGATGGACACAGGCCAATACCCTTTCTTGAGGACAGCTTTAAGATTCCTCCTGTTGTCATGTATCATTGA 1296 0.49 MHKVTEEKDGSETETLKPIVDPFPFPQLATVKPNFFIKSHLPMKRTLRPLFALLLLLVFAATLISRAVLRRGILSIELEYRVRIHHPSPPQLNATLLHHAAVEIGEEKFKQEIQNLLDGNFGSHARHRTFVSWRRFIHHDSGGGAAPNLPATLRSPLFYRYWLDFRKVLHDWFRKRRFQPGIMSELTRSIKLPIDSHRKVVTKNKNKYASCAVVGNSGILLNRDYGSEIDAHEVVIRLNNARVDHFETKVGKKTSISFMNSNILHLCARRAGCFCHPYGDHVPIVMYICQAVHFLDYTVCNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEETGKGLEKWGEAHDGALFHYSSGMQAVMLALGVCDRVSIFGFGKSASAKHHYHTNQKAELHLHDYEAEYAFYRDLVDGHRPIPFLEDSFKIPPVVMYH 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01204 431 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 43 431 - -
Spst11g01204 431 Gene3D Glycosyl transferase family 29 89 413 IPR038578 -
Spst11g01204 431 Pfam Glycosyltransferase family 29 (sialyltransferase) 193 410 IPR001675 GO:0006486|GO:0008373
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01204 176 375 Glycosyltransferase AT3G48820 23.039 1.13e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01204 K00786 - gmx:100816284 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01204 11 36361446 36362741 Spst11g01204 11 36361446 36362741 ECH