Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01196 ATGGCTAAACCCCACCATCTCATTTTCCTTCTTCTTCTCTGCGCCACTCTACAATTATCTTTATCTTCACCCTCCGATCACCTCTACGATGTTGGAGAACTTGTCCCATTGTTTGTCAACAAAGTCGGGCCCTTCAACAACCCCAGTGAGACGTATGAATACTATGATTTGCCATTCTGCGCCCCAGACCCAATTGTAGAAAAGAAAGAGTCCCTGGGGGAAGTTCTCAATGGTGACCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTCCGGAAGGAAAAGATTGATGAGACCTTGTGCTCAAAGAAGCTTACAATTGATCAAATTGCGTTCTTTAGGCGAGCTATAAACAGAGAATTTTACTTTCAATTTTACCTGGATGATCTTCCATTCTGGGGGTTCATTGGGAAACTTGAGGAGGATGGGTTGACTCCTGGTGGAGGAGGACCAAACTACTACCTTTTTACACATGTTCAATTTGATGTTCATTACAATGGGAATCAAATCATACAAGTAAATGCATTTGGCGATCCAAATCGCGCTGTAGATATTACTAAGGATGTTGATCTTGATGTTAAGTTCACTTATTCTGTTACCTGGAATGCCACTAAAACACCTTTTGAGAACAGGATGGATAGATACTCAAGAGCTTCGTTGATGCCTGTGCATCAGCAAGTTCATTGGTTCTCATTCATCAACTCGATTGTCATCATTTTGCTTTTGACTGGTTTGCTTGCCCTGCTGTACATGCGACATCTGAGGATTGATTTGAAAAAGTACTCTAATGCAAATGAAGAAGATAAAGAGGTTGGTTGGAAGTCTCTCCATGGTGACGTATTCAGGCCTCCTCCAAACTCATCCTTACTTTTTGCTGTTGTGGGAACTGGTACCCAATTGCTAATCTTGCTTTGTGTCTTGCTGTTTCTCGCACTTATTGGCATCCTCTATCCCTACAATCGTGGAGGACTGTTAAATTGGCTCGTCTTGTTGTATGCTCTTTTTTCTGTATTTTCTGGCTACACTGCAGCCTCCTTCCATGGCCAGTTTGCTGAGAATGGATGGGAAAGGACTGTTGGTCTTGCAGGGATTCTTTACACTGGACCAGTGTTTGTTGTAGCCTCTGTCCTCAACATTGTTGCAATCTCTTACAGGGCTACAATTGGACTCCCATTTGGCTCCATTATTGTGATTCTTGTTTTATTCAAATTTCTCGGCATCCCATTGCTTGCATTTGGTGGAGTGATTGGATATCGTTTTAGATCCAAATTCCAAAGCCCCTCGGCTACGAAGAGACACCCAACAGACATTCAACAGCTTGCTTGGTACAGGAGAACACCATTTCTAATGTTTATTGGGGGTCTTGTGCCTTTTAGTGCAATTGTCCTGCAACTACACCAGGTGTATGCTAGTATGTGGGGCTACAAAATATACACTCTTCCGAGCAATTTATTTGCCACATTCATTTCTGTCATTGTGATTGTTTCACTTGTCAGTATTGGCTTGACATACATTCAACTATCTGTGGAAGACCATGAATGGTGGTGGAGATCAGTGCTGTGTGGTGGCTCAACAGCCATTTTCATGTTTGGGTATTGTATATACTTCTATGTGAGATCAAATATGAGTGGATTCTTGCAGCTATCCTTCTTTATTGGCTATAATGCAAGCCTGTGCTATGCTTTCTTCCTAATATTTGGTGCCATCAGTTTCAGAGTTTCATTTCTCTTTGTTCGCCTTATATATCACAATGTTAAAAGAGAGTAA 1764 0.4172 MAKPHHLIFLLLLCATLQLSLSSPSDHLYDVGELVPLFVNKVGPFNNPSETYEYYDLPFCAPDPIVEKKESLGEVLNGDRLSNALYEFKFRKEKIDETLCSKKLTIDQIAFFRRAINREFYFQFYLDDLPFWGFIGKLEEDGLTPGGGGPNYYLFTHVQFDVHYNGNQIIQVNAFGDPNRAVDITKDVDLDVKFTYSVTWNATKTPFENRMDRYSRASLMPVHQQVHWFSFINSIVIILLLTGLLALLYMRHLRIDLKKYSNANEEDKEVGWKSLHGDVFRPPPNSSLLFAVVGTGTQLLILLCVLLFLALIGILYPYNRGGLLNWLVLLYALFSVFSGYTAASFHGQFAENGWERTVGLAGILYTGPVFVVASVLNIVAISYRATIGLPFGSIIVILVLFKFLGIPLLAFGGVIGYRFRSKFQSPSATKRHPTDIQQLAWYRRTPFLMFIGGLVPFSAIVLQLHQVYASMWGYKIYTLPSNLFATFISVIVIVSLVSIGLTYIQLSVEDHEWWWRSVLCGGSTAIFMFGYCIYFYVRSNMSGFLQLSFFIGYNASLCYAFFLIFGAISFRVSFLFVRLIYHNVKRE 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01196 587 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 19 585 IPR004240 GO:0016020
Spst11g01196 587 Pfam Endomembrane protein 70 51 544 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01196 Spst-Chr11 36277157 36280869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01196 22 587 Miscellaneous Gene Families AT2G01970 49.123 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01196 K17085 - gmx:100818419 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01196 11 36277157 36280869 Spst11g01196 11 36277157 36280869 ECH