Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01190 ATGCAGTTTCGCAAAACATGGCATCTTTGTGTGGGTTTGGCTTCTGAGGAGTTTCTAGAGCTTACCAAAAGTGCACTGCTGGCTGCTCTGGAAGCTCTTCCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAACTAGGATTGTATGATGTTCAAGGTCCAATACCTGTCGTGAAAAATGTTTTCATTCCTCCTGATGCAGAGGGAACCTTGCCTATTGAGCTTGAAGATGTCATGCCTTTGTTACAGTTTCTGGCTCCTGTGGACACTTGTAAGGACCGCATTGCATCTGCACTTGAAACACTTAGACCAACAACTTCATGGGAAAGAACTACGGGAGCAGGTCAAGGACTGGATGGTGTTCTGATAGGTGGGCGTGGTTTTGGGATGGCAATGGAAGCTCTCTGCAATTACCTTGGATCGGAATATGGGAGCACTTTTGCTTTAGCTAGAGTCTTTGCTTTCTTGTCTGGTCCCCCTGATTATGGAGCTGGACAATTGGACACAAGACGATATGGTGAGCAATATGCAAGCAAGGGAGAGGATGCAGATCGTGCTTTACTCCCAGAGCAGACACCCTTCTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTATGTGTTGACATATTTGCTGTAACAAATGAGTACACTGATTTGGCATCCTTAAAGTTTCTGAGTATAGAAAGTGGGGGTTCCTTATTTTTATACACAAGTACCGAGGACTCAACATTGCCTCAGGACATGTATCGAATGTTGAGTCGGCCATATGCTTTTGGTTGTGTCCTGCGGTTAAGAACCTCAACTGAATTTAAACCTGGAAATTCTTATGGTCACTTCTTTCCAGATCCACAGTATGAAAACGTTCAACACATCATATGTTGTGATTCTTATGCTACATATGCTTACGACTTTGTGTTTGAGAACAACATTGGATTTTCCAGAAATAAATCAGATGTTCCTACAATTCAGATTGCATTTCAGTACTCAGTTGTTGTTCCTCCTCAGGAACTTTCTAATTCAGAAGAGACTTCTACAAATAGGTATGGTGAAGACCAATTCATTCATTTGAACAGAACCAAGCATTCCCTTCAGCGTAGGCTAAGGATCCGAACATTGCAATATGGTGTTGCTCAGAGCTTTCGTGAACTTTGTGATAGTTGTGATCCTGAAGTTGTTCTCTCTCTCCTGGTTCACAAGGTTATATTAGCCTCTTTGGAGGAAGGAGTTAGGGAGGGTCGAATTTTACTTCAAGAATGGCTAGTGATGCTCACAGCTCAGTACAATGATGGATATGAGCTTATTCAGTATAGCGATGGAGGTTCCATAAGATCTCAGATTGATGTTGCATTGTCTCAATGTCCTCAACTACAGCCCCTACCGCGCCTAATTTTTGCTCTCCTTCGAAGTCCTCTTCTCCGGTTTCATGAAGAAGGGGTTCATCCCGACTACCGCATCTATCTTCAATGCCTTTTCAGCATGTTGGAACCCAGTTCCCTTCATCGTGCTGTGTATCCTGTGATGACATCATATGCTACCCCAGATAAACAAGCATATCCTCGCCATTCATTGAGTCGTGCCGCACTGATTACCAGCGGCAGTCCGATATTTTTCCTTGATGCATTCACAATTTTGATTGTGTTCTACTCTTCAACTGCAGACCCGACAATTCCTTTTCCTCCACCCCATGATTGTTTGTTAAGGACTACAATCAACAAATTGAAGCAAGATAGATGCATCACTCCCAAACTCATTTTCATTCGAGGCGGACATGATGATGCGTCAATTTTTGAGAACTTTCTGATCGAAGAGCAGGATGTTGATGGAAGTGGTCTTACCAGTGTGATGGGTTTTGTTTCCTTCCTAGAAGATATTAGACAAAAAGTTCTGGAGTTCATGAAATAA 1914 0.431 MQFRKTWHLCVGLASEEFLELTKSALLAALEALPPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDAEGTLPIELEDVMPLLQFLAPVDTCKDRIASALETLRPTTSWERTTGAGQGLDGVLIGGRGFGMAMEALCNYLGSEYGSTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTEDSTLPQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHFFPDPQYENVQHIICCDSYATYAYDFVFENNIGFSRNKSDVPTIQIAFQYSVVVPPQELSNSEETSTNRYGEDQFIHLNRTKHSLQRRLRIRTLQYGVAQSFRELCDSCDPEVVLSLLVHKVILASLEEGVREGRILLQEWLVMLTAQYNDGYELIQYSDGGSIRSQIDVALSQCPQLQPLPRLIFALLRSPLLRFHEEGVHPDYRIYLQCLFSMLEPSSLHRAVYPVMTSYATPDKQAYPRHSLSRAALITSGSPIFFLDAFTILIVFYSSTADPTIPFPPPHDCLLRTTINKLKQDRCITPKLIFIRGGHDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDIRQKVLEFMK 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01190 637 Gene3D von Willebrand factor, type A domain 9 260 IPR036465 -
Spst11g01190 637 Pfam Sec23/Sec24 helical domain 392 504 IPR006900 GO:0006886|GO:0006888|GO:0030127
Spst11g01190 637 SUPERFAMILY Helical domain of Sec23/24 392 508 IPR036175 GO:0006886|GO:0006888|GO:0030127
Spst11g01190 637 SUPERFAMILY beta-sandwich domain of Sec23/24 260 391 - -
Spst11g01190 637 SUPERFAMILY vWA-like 15 258 IPR036465 -
Spst11g01190 637 Gene3D Sec23/Sec24 helical domain 358 521 - -
Spst11g01190 637 PANTHER SEC24-RELATED PROTEIN 16 630 - -
Spst11g01190 637 Pfam Sec23/Sec24 trunk domain 13 255 IPR006896 GO:0006886|GO:0006888|GO:0030127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01190 - - gmx:100807557 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01190 11 36221903 36230857 Spst11g01190 11 36221903 36230857 ECH