Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01177 ATGGCGCCTCGGAAACCTCGCGAGCGTGAAATCCTGTTCGACTCCGTCATCGCGCTCGTCTTCATCCTTGTCGCCTGCGTCGACCTCTGCGACGGCGCCACAGTCGTCGACGTCTACCGCCTCATCCAGTACGACATGTCTGGCGTTCCTTTCGGATCTCGACTCGCCAGTCTCAACCACCACGCCGCCTCGCTCCACTTCTCTGCGCACGCTGATCTCTCTCGCACCGTCCTCCTCATACCACTTCGCGAACTTAACATATCTTTTGTCAAAGAATATATTGCTGAAAGCAAACCTCTTGGGGGTTTAATATTTTTGCTTCCCCGGATGTTCAGTTTTGAAAACAAAGATGGTATCGTAAGTAACCATCAAGATGGGAGTAAAGAATCGCTGAAGAATGTATTGGCTGAACTTGAACAAATACTTATACACGCCAACTTACCTTATCCTGTTTATTTTGCATTTGAGGATGACCATATTGATGCTGTGTTAGCTGATATCAAGAAGAATGATGTCACTGGTCAGCCTGCTACTGCAACAACTGGCGGATACAAATTTGTTGTTTCAGCCGCAGAACCAAGGAAAGTTGTATCTCCTCCCATTACAAATATTCAGGGATGGTTGGCAGGCCTGAAGACAGATGATGATGCTCACCAATTACCCACCATTGCGATAGTGGCATCATATGACACCTTTGGGGCTGCTCCTGCATTATCAGTGGGAAGTGATAGTAATGGAAGTGGCATTGTGGCTCTTCTTGAAGTAGCTAGGCTGTTTTCTCTCTTGTATTCTAATCCGAAGACAAGAGGACAATACAATCTGCTGTTTGGGCTAACGTCTGGTGGGCCTTACAACTACAATGGAACTCGTAAGTGGCTTCGGAGCTTTGATCAACGTCTGCGTGAGAGCATTGACTATGCTATTTGCTTAGACAGTATTGGTTCTTGGGAAAATGAATTGTGGATTCATGTGTCTAAGCCTCCAGAAAATGCCTTCATTAAGAAAATTGTGGAAGATTTTTCAAGTGTTGCAGAAGAACTAGGTTTTAAAGTGAATCTGAAGCATAAGAAAATAAACATTTCCAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACCCTTTCTGAACTCTCTACAGCACCTGAATTGCTCGAAAAAACTGGTGGTTTGGTTGACAGCAGGCATTTTGTCAGTGAAGAAACTATTGTCAGAAGTGTAAAATTAATTGCTGAGAGTCTTGCGAGACATATTTATGGACATCAAGGAAAGAACATTCAGATATTTGCAGACAACACTAACTTGGCTGTTAATCCTTCTTATGTTCGGTCATGGTTAGATGTTTTGTCCCAAACGCCACGAGTAGCTCCATTTTTCTCAAAAGATGATCCTTTTGTCATGGCACTGAAAAAGGAATTAGAAGATCACACTGATGAGGTAAATCTGCATAGAGATGTGCTAGATGGAATGTTCACTTTCTATGATTCAACCAGGGCAAAGCTGAACATATATCAGTTTTTCCTTCCTATAGTCAAGATCGATGAATATTGCAGATACGAAATAGAGCTAAGGAAAATTAAGTAG 1605 0.433 MAPRKPREREILFDSVIALVFILVACVDLCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSAHADLSRTVLLIPLRELNISFVKEYIAESKPLGGLIFLLPRMFSFENKDGIVSNHQDGSKESLKNVLAELEQILIHANLPYPVYFAFEDDHIDAVLADIKKNDVTGQPATATTGGYKFVVSAAEPRKVVSPPITNIQGWLAGLKTDDDAHQLPTIAIVASYDTFGAAPALSVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICLDSIGSWENELWIHVSKPPENAFIKKIVEDFSSVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPELLEKTGGLVDSRHFVSEETIVRSVKLIAESLARHIYGHQGKNIQIFADNTNLAVNPSYVRSWLDVLSQTPRVAPFFSKDDPFVMALKKELEDHTDEVNLHRDVLDGMFTFYDSTRAKLNIYQFFLPIVKIDEYCRYEIELRKIK 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01177 534 CDD M28_nicalin_like 135 428 - -
Spst11g01177 534 Coils Coil 473 493 - -
Spst11g01177 534 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Spst11g01177 534 ProSitePatterns EF-hand calcium-binding domain. 243 255 IPR018247 -
Spst11g01177 534 SUPERFAMILY Zn-dependent exopeptidases 146 425 - -
Spst11g01177 534 Gene3D Zn peptidases 125 425 - -
Spst11g01177 534 Pfam Nicastrin 223 360 - -
Spst11g01177 534 PANTHER NICALIN 11 513 IPR016574 GO:0009966|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01177 5 512 EF-hand Containing Proteins AT3G44330 70.312 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01177 K26499 - gmx:100779713 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01177 11 36088963 36099733 Spst11g01177 11 36088963 36099733 ECH