Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01172 ATGCCCTCCTGTCATAACACCAACAACAACTTCAACCTCGACGAAGGTCTCATACAGAGCCACAGCAAGACTAGGAAACGAGGTTGTTCCTCCTCCTCTTCCTCTTCTCTTGTAAGAAGATACCGTTTCAAGAGAGCCATTTTGGTTGGGAAGAAAGGAGGGTCCAGCACCCCAGTTCCCATGTGGAAGACCAAAACAACTTCTCCTTCTCTTCCTACTCACCACACCAAGCCTTTGCATTCTTCTGCCTCCATGTTACCCTCCAAGGACAAGGAGCTCTCCGTGTCAGCCAGGAAACTCGCTGCTACACTCTGGGAAATCAATGATTTGCCTCCTTCCAGGGTCAAGAAGGAGTTCGAGGTTGATCAAATGAGAGGCTGCAAGGAGAAGGGTAGAGGCAGAGAGAAAGGTGCGGGGTTGTCCAGATCGGGCTTGTTGCGGCCACAGATGTCAGATCCATCGCATAGTCCTGTCTCTGAGAGGATGAAGGGGCTTGAAGGGGATAGCTGCAAAAGAAGAGTGTCAGGGTTTTCTCATCAGCTTCTGTCGGGTGATTACTGTTTGGATGCTCTGGATGCTCATAGCAATGCCAATTTAATTGAGGAAGTGGAAAATCAGTTAAAAAGCGAGAAGAATCGAGGCAAAATCACTGGTGGTGTTAAGAACCGTCTGAAGGAAGCTAGAAGTGGATTATCTACAACAAAGAAGCTTCTAAAGGTGTTAAATCAAATGTGCCTTAGAGAGCAGCAAGCATCAAGCATGCCCCTTGTCTTGGCTCTGGGGAGTGAGCTTGATCGAGTTTGCCACCAAATTGATCAACTGATCCATGAACAGCGTTCAAACCAGAACGATGTTGAGTATGTCATGCAGCATTTTGCAGAAGAGAAGGCTGCTTGGAAAAGAAGAGAACGAGAAAGGGTTCATGATGCCATAAAACACGTGGCAGAAGAGCTTGCGGTGGAGAAGAAGTTGAGAAGGCAAACTGAACGGTTGAACAAGAAGATTGCTAAAGAAATGTCTACTGTCAAAGCTTCCTATTTGAAAGCATCTAAAGAGCTTGAAAGGGAGAAGCGTGCAAAGGAGATCCTGGAGCAAATTTGTGATGAACTAGCTAGAGGCATTGGGGAAGATAGAGCACGGGTGGAGGAACTGAAAAGGGAATCGGCTAAAGTTCGGGAGGAGGTGGAGAAGGAAAGGGAAATGCTTCACTTAGCCAATGTTTTACGCGAAGAGAGAGTGCAGATGAAGCTTTCAGAGGCTAAGTATCAGTTTGAGGAGAAGAATGCTTTCCTAGAAAAGCTGCGAAATGAGCTTGAGGACTATATGAGGACTAAAGATGGGCAAAATGAGGATGTTTCTCCAGAATGTAAAAAGATCAAGGATCTTGAGTCTTATTTCAACAATGTCTATAGGGGATTCCAAAATGCAGAGAAAGAGGATGATTCAGATGTTGAAAATGATGTAGGACATGAAAGAAATGATGACTCAGATGACAGTGATCTCCATTCAATTGAATTGAACATGGATGATGACAGCAAAGGCTACAAGTGGAGTTTTGCTTGTGAAAATGATGGACAAGAGAAGAGATTTTCCATTGACAAAGAAAGTATAGGGAGGAAGTCTTTCTCCGAGAAAATTCAGTGGGGAAGTATTTGCTTCAACAAGGGAACTTCAAGTGGTAGGAAGAGGGATTTTTCTATAAATATTCAGGAAGTTTCTGATAATTTTGATCCTGATAGGTCAATTGAATTTCTCTCACAAGCTCGGATACAAGACGATAATGATGAAAGTCAAAGCAATAAGACTATAAAAGTGCTCCAAAACTCTATCTCATGTGTTAATTCTGATAAGATAAATGGTCTACTATTAACTTTGCAGTGTGCTGATGGAGAAGCAGGGGAAAAAGCTCTTGCCCAGAAGGGTGACAATTTGAAGCAAGAAATTGCAGGAAAAAAATCTGGATGTTGA 1968 0.435 MPSCHNTNNNFNLDEGLIQSHSKTRKRGCSSSSSSSLVRRYRFKRAILVGKKGGSSTPVPMWKTKTTSPSLPTHHTKPLHSSASMLPSKDKELSVSARKLAATLWEINDLPPSRVKKEFEVDQMRGCKEKGRGREKGAGLSRSGLLRPQMSDPSHSPVSERMKGLEGDSCKRRVSGFSHQLLSGDYCLDALDAHSNANLIEEVENQLKSEKNRGKITGGVKNRLKEARSGLSTTKKLLKVLNQMCLREQQASSMPLVLALGSELDRVCHQIDQLIHEQRSNQNDVEYVMQHFAEEKAAWKRRERERVHDAIKHVAEELAVEKKLRRQTERLNKKIAKEMSTVKASYLKASKELEREKRAKEILEQICDELARGIGEDRARVEELKRESAKVREEVEKEREMLHLANVLREERVQMKLSEAKYQFEEKNAFLEKLRNELEDYMRTKDGQNEDVSPECKKIKDLESYFNNVYRGFQNAEKEDDSDVENDVGHERNDDSDDSDLHSIELNMDDDSKGYKWSFACENDGQEKRFSIDKESIGRKSFSEKIQWGSICFNKGTSSGRKRDFSINIQEVSDNFDPDRSIEFLSQARIQDDNDESQSNKTIKVLQNSISCVNSDKINGLLLTLQCADGEAGEKALAQKGDNLKQEIAGKKSGC 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01172 655 MobiDBLite consensus disorder prediction 476 505 - -
Spst11g01172 655 Coils Coil 424 451 - -
Spst11g01172 655 Coils Coil 346 401 - -
Spst11g01172 655 MobiDBLite consensus disorder prediction 127 167 - -
Spst11g01172 655 Coils Coil 193 213 - -
Spst11g01172 655 MobiDBLite consensus disorder prediction 52 87 - -
Spst11g01172 655 PANTHER GB|AAF24581.1 33 611 IPR043424 -
Spst11g01172 655 MobiDBLite consensus disorder prediction 59 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01172 Spst-Chr11 36052873 36055708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01172 - - var:108340557 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01172 11 36052873 36055708 Spst11g01172 11 36052873 36055708 ECH