Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01171 ATGGCACTAGTAACAACAGACCCAACCATCAACGAGGGGCCTCTGTTCGCCGAGGTTGACATGGCTTCAGATTTCAACGCCCCCATTGTCCGAGCCACCGTTGTTCAAGCCTCCACAATCTTCTACGACACTCCAGCCACTCTAGCGCCATCTGGGGTGCTCCAGATTGGTCCATGCAACGATCCTTTGGATAAGGCAGAGAGGTTGTTGGGTGAAGCCGCAGGGCATGGGTCCCAGCTTGTGGTGTTTCCAGAAGCGTTTGTGGGAGGATACCCGCGCGGTTCCGATTTTGGTGTTTCTATTGGAAATCGCACGGCCAAGGGAAGAGAAGAGTTTCGCAAGTATCATTCTGCAGCCATTGATGTGCCTGGTCCTGAAGTGGATAGGTTAGCAGCAATGGCAGGAAAGTACAAAGTACATCTAGTGATGGGTGTGATAGAGAGGGATGGCTACACACTCTATTGTACCGTTCTATTCTTTGATTCTCAAGGTCATTACCTAGGAAAGCACAGGAAAATCATGCCAACTGCATTGGAGCGCATTATCTGGGGATTTGGGGATGGATCAACCATTCCAGTGTTTGAAACTCCCATTGGAAAGATAGGTGCTGCCATTTGTTGGGAGAACAGAATGCCACTGTTAAGAACAGCGATGTATGCCAAAGGTATAGAGATATATTGTGCTCCCACAGCTGATGCCAGGGATGTGTGGCAAGCATCAATGACCCACATTTCACTTGAAGGTGGATGTTTTGTTTTGTCAGCAAACCAGTTCTGTAGGAGAAAGGATTACCCTCCCCCTCCAGAGTATGTTTTTGCTGGCACAGAAGAGGACCTGACACCGGATTCTGTTGTTTGTGCTGGGGGCAGTGTCATTATATCACCGTCAGGGGCTGTTCTGGCAGGACCAAATTATGATGGGGAGGCACTGATCTCAGCAGACCTTGATCTTGGAGAAATAGCAAGAGCTAAGTTCGACTTTGATGTGGTTGGACACTATTCAAGGCCAGAAGTACTTAGTTTGACTGTAAAGGACCATCCAACGAACCCAGTTACTTTTACATCAACATCAAAAAATAGTGAAGACAACACCAAGTAG 1098 0.48 MALVTTDPTINEGPLFAEVDMASDFNAPIVRATVVQASTIFYDTPATLAPSGVLQIGPCNDPLDKAERLLGEAAGHGSQLVVFPEAFVGGYPRGSDFGVSIGNRTAKGREEFRKYHSAAIDVPGPEVDRLAAMAGKYKVHLVMGVIERDGYTLYCTVLFFDSQGHYLGKHRKIMPTALERIIWGFGDGSTIPVFETPIGKIGAAICWENRMPLLRTAMYAKGIEIYCAPTADARDVWQASMTHISLEGGCFVLSANQFCRRKDYPPPPEYVFAGTEEDLTPDSVVCAGGSVIISPSGAVLAGPNYDGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLTVKDHPTNPVTFTSTSKNSEDNTK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01171 365 Pfam Carbon-nitrogen hydrolase 63 324 IPR003010 GO:0006807
Spst11g01171 365 MobiDBLite consensus disorder prediction 345 365 - -
Spst11g01171 365 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 77 92 IPR000132 GO:0003824
Spst11g01171 365 CDD nitrilases_CHs 30 343 IPR044149 GO:0003824
Spst11g01171 365 PANTHER NITRILASE 14 359 IPR044149 GO:0003824
Spst11g01171 365 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 30 317 IPR003010 GO:0006807
Spst11g01171 365 FunFam Bifunctional nitrilase/nitrile hydratase NIT4B 20 329 - -
Spst11g01171 365 ProSitePatterns Nitrilases / cyanide hydratase active site signature. 202 215 IPR000132 GO:0003824
Spst11g01171 365 Gene3D - 21 329 IPR036526 -
Spst11g01171 365 SUPERFAMILY Carbon-nitrogen hydrolase 29 344 IPR036526 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01171 K13035 - gmx:100778110 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01171 11 36041862 36051403 Spst11g01171 11 36041862 36051403 ECH