Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01155 ATGGCAATTGAAGTAGAAAACGTCATTGGCGAAGAAACGACGCAAAGAATTGAAATGGAAAAAGATGGGAAGAGAGTGGTGATCCTAGGAGGTGGCGTTGCGGGATCCGTCGTCGCTAAATCTCTTCAATTCCATGCTCATGTCACCCTCATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAATTTGAGGTCAATGGTTGAGCCATCTTTTGCAGAGAGAACGTTGATCAATCACAGAGATTACCTTACCAATGGCGATATCGTTACATCCAATGCCATCACTATTACAGAAACTGAAGTGTTGACTGCAGATGGCCATCGAATTGGCTATGACTATCTTGTTATTGCCACTGGCCATGCAGATCCTGTCCCTAAAACTAGGAGTGCAAGACTTGATCAGTTCAAAGAAGATAATCAGAAGATAAAATCCGCTCATTCCATTCTGATTATTGGAGGAGGTCCCACTGGTGTGGAACTTGCCGGGGAGATAGCTGTTGATTTTCCAGATAAGAAGGTTATACTCGTACACAAAGGATCGAGGCTGCTAGAGTTCATAGGGGAAAAAGCTGGGAATAAGACTCTAAAATGGTTGAAATCAAAGAATGTTGTGGTGAAACTAGAGCAAAGGGTTGACCTGAACGGATTCACAGATGGACAGAAGATATATCGAACTTCAAATGGAGAGACCATTGAGGCAGATTGTCATTTTTTATGCATAGGGAAACCTCTTTCTTCAGCATGGCTTAAAGAAACCGTGTTGAAGAATGATTTGGATTCTCAAGGAAGGATCCAGGTAGATGAAAAATTGAGAGTCAATGGTCGGGGTAACATTTTTGCAATAGGAGATATCACAGATATTCGAGAAATCAAGCAAGGGTTTTTGGCGCAGCAGCAGGCTGAAGTGGTTGTGAACAACCTGAAGGTGATAATACAGGGAGCAGGTGAATGTAGGATGGAAACTTACAGGGCACATTCAGCAATTGCAATAGTTTCACTTGGGAGGAAAGATGCAGTGGCACAGTTTCCATTCTTAACAATCATTGGAAGAATTCCAGGATTTATTAAGTCTGGAGATTTGTTTGTTGGTAAAACAAGAAAACAAATGGGACTCAAGCATGATATTGAACAAGCTTGA 1140 0.4175 MAIEVENVIGEETTQRIEMEKDGKRVVILGGGVAGSVVAKSLQFHAHVTLIDPKEYFEIPWANLRSMVEPSFAERTLINHRDYLTNGDIVTSNAITITETEVLTADGHRIGYDYLVIATGHADPVPKTRSARLDQFKEDNQKIKSAHSILIIGGGPTGVELAGEIAVDFPDKKVILVHKGSRLLEFIGEKAGNKTLKWLKSKNVVVKLEQRVDLNGFTDGQKIYRTSNGETIEADCHFLCIGKPLSSAWLKETVLKNDLDSQGRIQVDEKLRVNGRGNIFAIGDITDIREIKQGFLAQQQAEVVVNNLKVIIQGAGECRMETYRAHSAIAIVSLGRKDAVAQFPFLTIIGRIPGFIKSGDLFVGKTRKQMGLKHDIEQA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01155 379 PANTHER APOPTOSIS-INDUCING FACTOR 1 20 372 - -
Spst11g01155 379 SUPERFAMILY FAD/NAD(P)-binding domain 20 287 IPR036188 -
Spst11g01155 379 Gene3D - 22 369 - -
Spst11g01155 379 Pfam Pyridine nucleotide-disulphide oxidoreductase 24 300 IPR023753 GO:0016491
Spst11g01155 379 FunFam apoptosis-inducing factor 2 22 370 - -
Spst11g01155 379 PRINTS FAD-dependent pyridine nucleotide reductase signature 148 166 - -
Spst11g01155 379 PRINTS FAD-dependent pyridine nucleotide reductase signature 112 130 - -
Spst11g01155 379 PRINTS FAD-dependent pyridine nucleotide reductase signature 264 286 - -
Spst11g01155 379 PRINTS FAD-dependent pyridine nucleotide reductase signature 26 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01155 Spst-Chr11 35904483 35907594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01155 26 292 EF-hand Containing Proteins AT4G28220 21.345 9.98e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01155 K22745 - gmx:100813439 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01155 11 35904483 35907594 Spst11g01155 11 35904483 35907594 ECH