Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01154 ATGGCGGAGAAGAAAGTGGTCATCGTAGGAGGTGGTGTTGCCGGTGCCATCCTTGCAAAAAATATACAAAATCAAGCCAACGTCACCCTTATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAGTTTGAGGGGATTGGTTGAGCCCTCTTTTGCTGAAAGGATAGTGATCAACCATAGAGAGTACTTCAAAAAGGGTGATCTTGTTGTATCCACTGCAGTCAACATAACTGAAACTGAAGTGTTTACTGCAGATGGCCAGCAGATTGCGTATGACTATCTTGTTATTGCCACTGGCCACATAGAACCTATCCCCAAAACCAGGAGTGAAAGACTTGACCAATACAAAGAAGAAAATGCAAAAATCAAATCTGCAAGTTCAGTTTTGATTGTTGGGGGAGGTCCAACTGGTGTTGAGCTTGCAGCAGAGATTGCTGTTGATTTTCCTGATAAAAAGGTCACTATAGTGCATAAAGGAACAAGGTTGCTGGAATACATTGGGCAAAAAGCTTCAAGTAAGACTTTGAAGTGGCTCACATCAAAGAAAGTTGATGTGAAACTAGAGCAATCTGTCGACTTGACATCCTCTACGGAAGATCATAGGACATATGAAACTTCAAATGGAGAGACTATAGAAGCAGATGCTCATTTTCTATGTATAGGGAAACCACTTGGTTCCGCATGGCTTAGAGAAACCCTTCTAAAGGATGACTTGGATGTTGTTGGAAGGATCAAGGTCGATGAAAACTTGAGAGTGAAGGGCAGGAGCAACATTTTTGCAATTGGAGACATTACAGATGTTCAAGAAATCAAACAAGGGGCGTATGCAAGTGGTCATGCTCAATTGGTTGCCAAGAACCTGAGGCTATTGATAGAAGGAGGAGGCAAAGAGCGCAAGTTGGGAACATACAAGGCGCAGCCACCAATCTCTATAGTCTCACTTGGAAGGAAACAGGCAGTGGCACAATTCCCATTCATGACAGTGCTTGGAAGGTTTCCTGGCATGATCAAGTCAGGAGATTTGTTTGTGGGGAAAACCAGAAAGGATTTAGGACTGGAACCTCATGTTAAAAAGTCTTAA 1083 0.4275 MAEKKVVIVGGGVAGAILAKNIQNQANVTLIDPKEYFEIPWASLRGLVEPSFAERIVINHREYFKKGDLVVSTAVNITETEVFTADGQQIAYDYLVIATGHIEPIPKTRSERLDQYKEENAKIKSASSVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGTRLLEYIGQKASSKTLKWLTSKKVDVKLEQSVDLTSSTEDHRTYETSNGETIEADAHFLCIGKPLGSAWLRETLLKDDLDVVGRIKVDENLRVKGRSNIFAIGDITDVQEIKQGAYASGHAQLVAKNLRLLIEGGGKERKLGTYKAQPPISIVSLGRKQAVAQFPFMTVLGRFPGMIKSGDLFVGKTRKDLGLEPHVKKS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01154 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Spst11g01154 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Spst11g01154 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 244 266 - -
Spst11g01154 360 SUPERFAMILY FAD/NAD(P)-binding domain 1 288 IPR036188 -
Spst11g01154 360 FunFam apoptosis-inducing factor 2 2 351 - -
Spst11g01154 360 Gene3D - 1 344 - -
Spst11g01154 360 PANTHER APOPTOSIS-INDUCING FACTOR 1 3 353 - -
Spst11g01154 360 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 276 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01154 Spst-Chr11 35898759 35901444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01154 6 272 EF-hand Containing Proteins AT4G28220 24.398 1.29e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01154 K22745 - gmx:100817682 618.231