Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01139 ATGGAGTTTCACTCTCTTCCCAAACTCTACCTTCTTCTTACCCTATCCATTCTCTTTCTGTCATCTTTCCAGGCACAAGCTACTATTAAAATCTCCTATTGTGATAAGAAGACAGACTATGCTGTGAAGGTGTCTGGAGTTGATATTTCACCAGATCCTGTGAAGAGTGGCCATCCGGCTACCTTTAAGATCTATGCTAGTTCAGGTAAATCTATTTATGGTGGAGAGGTGGTAATTGGAGTTTCATACGTTGGGGTGCCTGTCCATACAGAAAGCATTGATCTTTGTAAAGAAGTAAAATGCCCTGTTGCTAATGGCAATTTTGTGATTTCACACACTCAAACATTGCCTGCAATCACTCCACCGGGACCTTACTCTCTGAAGATGACACTGAAGAATGATCGGGATGAGTTGTTGACTTGCATCAAGTTTAACTTTAAGATCGTTCTTGGATCTCTTGTGTCTGATATGTGA 474 0.4114 MEFHSLPKLYLLLTLSILFLSSFQAQATIKISYCDKKTDYAVKVSGVDISPDPVKSGHPATFKIYASSGKSIYGGEVVIGVSYVGVPVHTESIDLCKEVKCPVANGNFVISHTQTLPAITPPGPYSLKMTLKNDRDELLTCIKFNFKIVLGSLVSDM 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01139 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
Spst11g01139 157 SMART pgtp_13 31 146 IPR003172 -
Spst11g01139 157 Gene3D - 27 150 - -
Spst11g01139 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 8 149 IPR039670 GO:0015918|GO:0032934
Spst11g01139 157 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 29 150 - -
Spst11g01139 157 Pfam ML domain 29 148 IPR003172 -
Spst11g01139 157 SUPERFAMILY E set domains 29 149 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01139 Spst-Chr11 35715907 35720569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01139 - - pvu:PHAVU_011G100100g 268.085