Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01123 ATGGACTCCAGCAGCAATCAAAACCTACCCAGATCGTCTCTTGCAAAGGAGCTTCCACCAGTTGATTTATTTGTGACAACAGCAGACCCTGAGCTTGAACCACCCATTATCCCAGTGAACACTGTGTTGTCTCTGTTGGCACTTGATTACCCAACTCACAAGCTTGCTTGTTATGTTTCTGACGATGGTTGCTCCCCTCATACCTTCTACGCTCTTCAAGAAGCCTCTAAATTTGCAAAGTTTTGGGTACCATTCTGTAAGAAGTATGATGTGCAAGTTAGAGCTCCATTGAGGTACTTCTCTGATAAGCCTGCAGTTTCCATGGCCAACGAAACATCAGAATTCAAACAAGAATGGTTACAGATGAAAGAGAAAAGGCCAAAACAGTCACATCATTTCAAAGCTGGTGCTATGAATGTGTTGACAAGGGTATCTGGGTTGATAACCAACGCTCCCTTTATGTTGAACGTGGACTGTGACATGATTGTAAACAATCCAAAGGTTGTTCTGCATGCCTTGTGCATTCTGCTTGATTCCAAAGGTGAAAAAGAAGTTGCATTTGCTCAATTTCCCCAACAGTTCTATGCTACATTGAAGGACGATCCTTTTGGAAATCAAATGGCAATCTTTATCAAGTACTTGACTGCTGGAATGGCTGGTTTGCAAGGACCTTTCTACAGTGGAACAAACTGCTTAAATAGAAGAAAAGTTATATATGGTCTTTCTCCTGATAGCATGGAAAATGGAAATAGTTTATCAGAGGAGGAATTAGAACAAAAGTTTGGAGATTCAAAGGAGATTGTGAAAACAGTTGCTCATGCTTTTGAGGGGAAGACATATTTGCCTAGTGATGTTAATATTTCTATCGTTGTTGACATTGCAACCCAAGTTGCTAGTTGTGGATATGAACATGGCACTGGCTGGGGCAAACAGGTGGGTTGGATATATGGATCAATAACAGAGGACAAACTCCTTGGACTGACCATACATGAAAAAGGTTGGAGATCAGAATTGTGTACACCAAACCCAATTGCCTTCACTGGAATTGCTCCAGGAGGTGGCCCAACTGCAATGGCTCAACAAAAGAGATGGGCCATAGGATTGCTTGAGATCTTCTTTAGCAAGCACTGTCCTCTTTTTGGCACCATGTTCCATAAGCTTACTTTGAGACAATGCTTAGCATATATGTGGATCATCAACTATTGGGGCCTAAAGTCAATCTTTGAAGTTTCCTATGCATGTCTCCTTTCTCATTGCATTATCACCAACTCCAACTTCTTGCCCAAGGACCTAGGCATGTGTATTGCCATTGCATTTTTCACAGTTTACAAGATATATACTATATCAGAATATTTGGCAGCAGGACTGTCATTTCGAGCATGGTGGAACAATCAAAGGATGTCGAGAATAGCATCCATGAATGCTGGTTTTTGTGCATTTATTTGCATCCTACTTAAAATGTTAAGAATATCTGACACTATATTTGACATAACAAAGAAAGATGTACCTCTGACAGATGATGTTAGAGATGATAAGGATGCTGGTCGGTTCACCTTTGATGAGTCCCTAGTTTTCTTGCCAGGCACTACCATTTTGTTGTTGCAGTTGTCGATATTGTTTATGAAGTTATTGAGATTGCACCCACTAAGTGAATGTGGAGTAGTTGAGATTTTTTGTAGTATTTATTTGGTAATTTGCTATTGGCCATTTTTTAGAGGATTATTTGAGAAAGGGAAGTATAGGATTCCCTTCTCCTTGATATACAAGTCAATTATCTTAACATGTTTCTTTGTACACTTATGTAAAGGAACCATTGATGGTTAA 1824 0.3986 MDSSSNQNLPRSSLAKELPPVDLFVTTADPELEPPIIPVNTVLSLLALDYPTHKLACYVSDDGCSPHTFYALQEASKFAKFWVPFCKKYDVQVRAPLRYFSDKPAVSMANETSEFKQEWLQMKEKRPKQSHHFKAGAMNVLTRVSGLITNAPFMLNVDCDMIVNNPKVVLHALCILLDSKGEKEVAFAQFPQQFYATLKDDPFGNQMAIFIKYLTAGMAGLQGPFYSGTNCLNRRKVIYGLSPDSMENGNSLSEEELEQKFGDSKEIVKTVAHAFEGKTYLPSDVNISIVVDIATQVASCGYEHGTGWGKQVGWIYGSITEDKLLGLTIHEKGWRSELCTPNPIAFTGIAPGGGPTAMAQQKRWAIGLLEIFFSKHCPLFGTMFHKLTLRQCLAYMWIINYWGLKSIFEVSYACLLSHCIITNSNFLPKDLGMCIAIAFFTVYKIYTISEYLAAGLSFRAWWNNQRMSRIASMNAGFCAFICILLKMLRISDTIFDITKKDVPLTDDVRDDKDAGRFTFDESLVFLPGTTILLLQLSILFMKLLRLHPLSECGVVEIFCSIYLVICYWPFFRGLFEKGKYRIPFSLIYKSIILTCFFVHLCKGTIDG 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01123 607 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 123 592 - -
Spst11g01123 607 Pfam Cellulose synthase 21 123 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst11g01123 607 Pfam Cellulose synthase 248 597 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst11g01123 607 SUPERFAMILY Nucleotide-diphospho-sugar transferases 40 402 IPR029044 -
Spst11g01123 607 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 242 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01123 Spst-Chr11 35559378 35563602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01123 17 604 Glycosyltransferase AT2G32530 38.552 3.32e-149 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01123 - - gmx:100500469 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01123 11 35559378 35563602 Spst11g01123 11 35559378 35563602 ECH