Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01118 ATGGCACCATCCAAATTCTTCTCCTTCTCATTACTCTTGCTATCCACAACAGTGCTTTACAAAGCCGAAGCTGAAGAGCCTCTTCCAAAAACCATGATTTTCTACCTCCAAGACACAGCAAAGGGACCCAATGCAACCGTTTCCCCAATAATTGGCCTCACCGGAAAGGATTGGTCCTTCGACCAATTCGGAACCATATTTGCGGTGGACGACCCTGTCATGCTGAGCCCAAGCCCAATGTCTGCTGAAGTGGGCCAGATCCAAGGCCTGATGGTAGTGTCGGCCCACGATGGGGCTGATGTATATGCTTCGCTTTCAATTGTTTTCACGAATTTGCAGTACAGTGGTAGTAGCATACAGATCCAAGGTGTTATTCGTCAACGTGAGAGATATAGAGAACTCTCTGTGGTGTCTGGGACTGGCAAATTTCGATTTGTAAGGGGCTACGCTGCATTTGAGACTTCATTCTATGATCCAAAAACTGCACACTCCATCATCTACCATAAAATGGCACCCTGCAAATTCTTGTCGTTCTCATTTGTACTTTTGATATCCACAACGATGCTTCACGAAGCTAATGCTCAATTCAATGTTCCAACAACTTTGACTTTCTACCTCCAAGACATAGCAAAGGGACCCGGAGCAACCGTTTCCCCGGTCACGGGCCTCACCGGAAAGGATTGGACCTACGACCAATTCGGAACCATACTTGCAGTGGATGACCCTCTAATGATGGGCCCAAACCCAATGTCCACCCAAGTGGGCCGGGCCCAAGGCGTGCTTGTAGTGTCGGCCCAGGATGGTGCTAACGTGAACGCGCTTCTTTCACTTGTGTTCACGAACTTGGAGTACAGTGGAAGCACGTTAGAGATCCAAGGAGTTAGTCGGCAACGTGAGAATTATAAAGAGCTTTCGGTGGTGTCTGGAACGGGGAAGTTTCGGTTTGTGAGAGGCTATGCTTCGTTGCAAACTCTGCTCTACGATTCTGCAACGGCACATTCTATCCTACGCCACTCAAAGAAAATGACACCATCATTTTCAACCCCAACAAAGCTCTTGTCCCTTTCAATGCTCATGATATCCATGACAATGGTTTATGAAGCTTTTGCTCAATTACCTCAACCTGTGCCTCATCAAACAACGTTGGTGTTCTACCTGCAAGACATAGCAAAAGGGTCTAATGCCACAGTGGCTACAGTGACTGGAATCAAAGGAAAGGATTGGTCCTACAACACATTTGGAACCATATTCGTGGTTGATGACCCTGTTCTGTTGAGCCCAAGCCCAACCTCTGAATTAGTGGGTCGGGCTCAAGGTGTACTCGTAGTTTCGGCCCATGATGGGTCTAATGTGAATGTGGCTATTTCAATTGTGTTCAACAATTCGCAGTACAAAGGTAGCACCTTGGAGCTCCAAGGTATTAGTCGTCAACGTGAGAATTTAAGGGAACTCTCAGTGGTGTCTGGTACTGGTAAGTTTCGCTTTGTAAGGGGCTATGCTACACTGCAAACTATGCAATATGATCCCCAAACTGCAAACTCCATCATTCGTTTGCCACCCTATAAATACAGCTCTCTGTTCTCAGAAACCACATTAAAAAGGATCCTTGTTCCAAAGGTTGAAATGGATGACAAAGAGAAACAACATCCACAACCCCATGTAGAGTTACCAATAGATGTTTCCATTACCAGAACTCAATCCAATTGCTTCCAAATCCAATGTTTGTCCTCTATTCTGACAAAATTCCATGCAGGGTACTTTAGGATCAGTTTGTCTCTCACAAGCCAAGCTTTTCTATTGAAGATCCTCATTGAACCAATCCAAGATGCACATGCTCTCAGACGTTTGTTTTCATCCATACCCTCTTCTGTCCACACTCTCCTATGGTTCCTGGCCTTGTTCGCACTAGCCACACTCTCTTTTCTCTACATTCTAAAATGTCTTTTACACTTTGACATGGTTAAGGATGAATTCTTAAACTACGTGGGGGTAAATTACCTATTTGTCCCCTGGATTTCTTGGCTCATTTTGCTAGAATCATCACCATTCCTCTCCCCAACAACACTTCTTTACAAAATACTTTGGTGGGTGTTTGTTGTGCCAGTGGTGATGCTTGATGTGAAGATTTATGGCCAGTGGTTTACAAAAGGGAAGAGGTTTTTGTCAATTGGAGCAAACCCAACAAGTCAGTTGTCTGTGATTGGAAACTTGGTGGGTGCACAAGCTGCTGCACAAATGGGTTGGAAGGAGAGTGCACTGTGCATGTTTTCTTTGGGTATTGTTCATTACTTGGTGCTTTTTGTGACACTGTATCAGCGATTAGCAGGGAACAATAACATCCCTTCAATGCTGCGTCCAGTGTTCTTCTTGTTCTTTGCAGCACCAAGCATGGCAAGCTTGGCTTGGAACTCCATTTGTGGCAAGTTTGACACCACATGCAAGATTTTGTTCTTCCTCTCTTTCTTCCTTTTCTTGTCCCTGGTTTCAAGGCCTATGCTATTTAAGAAGTCGATGAAGAAGTTCAACGTGGCATGGTGGGCTTATTCGTTTCCTCTTACGGCTTTGGCACTGGCTTCGGTTGAGTATGCTCATGAAGTTAAGGGAATCATGGCTCACGCCATCATGTTTGTCTTATCATCTCTCTCTGTTCTTGTGTCTCTCGTATTAATGCTTATCACTGTTATCAACGCGACCAAGCACGCACTTACTCCCCTGTAA 2718 0.4511 MAPSKFFSFSLLLLSTTVLYKAEAEEPLPKTMIFYLQDTAKGPNATVSPIIGLTGKDWSFDQFGTIFAVDDPVMLSPSPMSAEVGQIQGLMVVSAHDGADVYASLSIVFTNLQYSGSSIQIQGVIRQRERYRELSVVSGTGKFRFVRGYAAFETSFYDPKTAHSIIYHKMAPCKFLSFSFVLLISTTMLHEANAQFNVPTTLTFYLQDIAKGPGATVSPVTGLTGKDWTYDQFGTILAVDDPLMMGPNPMSTQVGRAQGVLVVSAQDGANVNALLSLVFTNLEYSGSTLEIQGVSRQRENYKELSVVSGTGKFRFVRGYASLQTLLYDSATAHSILRHSKKMTPSFSTPTKLLSLSMLMISMTMVYEAFAQLPQPVPHQTTLVFYLQDIAKGSNATVATVTGIKGKDWSYNTFGTIFVVDDPVLLSPSPTSELVGRAQGVLVVSAHDGSNVNVAISIVFNNSQYKGSTLELQGISRQRENLRELSVVSGTGKFRFVRGYATLQTMQYDPQTANSIIRLPPYKYSSLFSETTLKRILVPKVEMDDKEKQHPQPHVELPIDVSITRTQSNCFQIQCLSSILTKFHAGYFRISLSLTSQAFLLKILIEPIQDAHALRRLFSSIPSSVHTLLWFLALFALATLSFLYILKCLLHFDMVKDEFLNYVGVNYLFVPWISWLILLESSPFLSPTTLLYKILWWVFVVPVVMLDVKIYGQWFTKGKRFLSIGANPTSQLSVIGNLVGAQAAAQMGWKESALCMFSLGIVHYLVLFVTLYQRLAGNNNIPSMLRPVFFLFFAAPSMASLAWNSICGKFDTTCKILFFLSFFLFLSLVSRPMLFKKSMKKFNVAWWAYSFPLTALALASVEYAHEVKGIMAHAIMFVLSSLSVLVSLVLMLITVINATKHALTPL 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01118 905 Gene3D - 576 903 IPR038665 -
Spst11g01118 905 Pfam Voltage-dependent anion channel 581 894 IPR004695 GO:0016020|GO:0055085
Spst11g01118 905 PANTHER S-TYPE ANION CHANNEL SLAH3 570 899 IPR030183 GO:0006873|GO:0008308|GO:0016020
Spst11g01118 905 CDD TDT_SLAC1_like 582 875 - -
Spst11g01118 905 FunFam S-type anion channel SLAH1 576 901 - -
Spst11g01118 905 Gene3D - 30 173 IPR044859 -
Spst11g01118 905 Gene3D - 366 521 IPR044859 -
Spst11g01118 905 Gene3D - 197 349 IPR044859 -
Spst11g01118 905 Pfam Dirigent-like protein 380 517 IPR004265 -
Spst11g01118 905 Pfam Dirigent-like protein 200 337 IPR004265 -
Spst11g01118 905 Pfam Dirigent-like protein 31 166 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01118 Spst-Chr11 35509906 35518042 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01118 K26672 - gmx:100794114 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01118 11 35509906 35518042 Spst11g01118 11 35509906 35518042 ECH