Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01104 ATGGCAGAACCTAAGGTCAAGTACGATCGCCAGCTCAGAATATGGGGTGATCAAGGACAAGCAGCCCTTGAGAAATCTAGTATTTGCTTACTTAACTGCGGTCCTACCGGTTCTGAAACTCTTAAGAATCTTGTTCTTGGTGGAATTGGAAGCATCACTGTAGTTGATGGGTCTAAAGTTGAAGAGGGTGACCTTGGAAACAATTTTTTGGTGGACGAGTCAAGCCTCGGAAAGTCAAAGGCCAGATGTGTGTGCTCATTTCTTCAAGAGCTGAATGATGCAGTGAAAGCTAAGTTTGTAGAAGAGTCTCCTGAAACATTGATTGAGACAAATCCATCATTCTTTTCTCAATTCACTTTGGTTGTTGCCACTCAGCTCGTGGAAAATTCAATGATAAAGCTTGACCGAATCTGCAGGGAGGAAAATGTTATCTTGATCTTTGCTCGCTCCTATGGCCTTACAGGCTTTGTTCGAATTAGTGTGAAGGAACATGATGTGATTGAGTCCAAGCCTGAACATTTTTTGGATGATCTCCGGTTAAATAATCCTTGGCCTGAACTCAAGAGATTTGCAGATGACATTGATTTGAATGTACAAGATCCTGTGGCCCATAAGCACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAGGCTTCCATCAACCAGAGAAGAAAAGAAGGAGTTCAAGGAGCTTCTTAAGGCTGGGATGGTTGCACAAGATGAAGATAATTATAAAGAAGCTATTGATTCATCATTCAAAGTATTTGCTCCCCGAGGAATAAGTGCGGAGTTGCAACAGATACTAAATGATAGTTCTGCTGAAGTGGATTCTAACTCATCAGATTTTTGGGTATTGGTGGCAGCCCTGAAGGATTTCATTACAAATGAAGGTGGTGGGGAAGCTCCTCTTGAAGGATCTATACCAGATATGACTTCTTCTACTGAGCAATATGTGCATTTGCAGAATATCTATCACGCAAAAGCTGAGGCTGATTTTCTTGTAATAGAAGGTCTAGTGAGAAGTACATTGAAGAAGATTGGTAGAGATTCAAATAGCATTCCAAGGTCAACGATTAAAAGCTTCTGTAAAAATGCTAGAAAACTCAAAGTTTGCAGGTACCGTCTAATTGAAGATGAGTTTAACTCTCCAAACCTACCTGATTTACAGAAGTACTTAACTGATGAGGATTACAGCATTGCTGTGGGAATTTATATTTTGCTTCGTGCTGCTGACCGGTTTGCTGCTAACTACAACAGTTTTCCAGGACAGTTTGACAGTGCAATGGACGAGGATATACCACGATTAAAGAGCACAGCAATTAGCTTACTTAATGACTTGGGATGCAACGGTGCCACTTTGGCTGAGGACCTTATCAGCGAGATGTGTCGCTTTGGTGCTGCAGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCATCGCAAGAAGTGATCAAGCTCATAACAAGGCAATTCGTACCAATGTCTGGAACCTACATATTCAACGGCATTGACCACAAATCGCAGCTGCGTTATGCCCGGTAA 1575 0.421 MAEPKVKYDRQLRIWGDQGQAALEKSSICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEEGDLGNNFLVDESSLGKSKARCVCSFLQELNDAVKAKFVEESPETLIETNPSFFSQFTLVVATQLVENSMIKLDRICREENVILIFARSYGLTGFVRISVKEHDVIESKPEHFLDDLRLNNPWPELKRFADDIDLNVQDPVAHKHIPYVVILVKMADEWAKSHGGRLPSTREEKKEFKELLKAGMVAQDEDNYKEAIDSSFKVFAPRGISAELQQILNDSSAEVDSNSSDFWVLVAALKDFITNEGGGEAPLEGSIPDMTSSTEQYVHLQNIYHAKAEADFLVIEGLVRSTLKKIGRDSNSIPRSTIKSFCKNARKLKVCRYRLIEDEFNSPNLPDLQKYLTDEDYSIAVGIYILLRAADRFAANYNSFPGQFDSAMDEDIPRLKSTAISLLNDLGCNGATLAEDLISEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTYIFNGIDHKSQLRYAR 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01104 524 FunFam NEDD8-activating enzyme E1 regulatory subunit 361 522 - -
Spst11g01104 524 CDD APPBP1_RUB 7 519 - -
Spst11g01104 524 FunFam NEDD8-activating enzyme E1 regulatory subunit 1 274 - -
Spst11g01104 524 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 505 IPR045886 -
Spst11g01104 524 PIRSF APP-BP1 1 522 IPR030667 GO:0019781|GO:0045116
Spst11g01104 524 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 518 IPR035985 GO:0008641
Spst11g01104 524 Gene3D - 2 275 - -
Spst11g01104 524 Gene3D - 348 521 - -
Spst11g01104 524 Pfam ThiF family 8 501 IPR000594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01104 Spst-Chr11 35392956 35403818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01104 8 157 EF-hand Containing Proteins AT2G30110 30.263 7.27e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01104 K04532 - gmx:100793799 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01104 11 35392956 35403818 Spst11g01104 11 35392956 35403818 ECH