Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01102 ATGTCTTGCCTCCTCCGATCTACGAAGTCTAAGATCCTCTCTTCTTACTCTTCACTTTCTAGAAGCTTCCCTTCCCTCTCCCGCGCCGGTCCCTCCCATGACCTCCTTCACAATCAGATCGGAGCTCTCTCTCCCCTCCCCAATCTCTTCCACCGCAACACCGCCTCCATTCCTCTCGCGAAGGAAAACGCTTCTAGCGGAGACTTGACTGGTCTTCCCAAAGTTCCTGCGAATAAGCTTGGCTGTGATTCGAATGCGATCAATTCGGTGATGTATAAAGCTTCTGGACTTGACACCACTATGCGGGCTGGTGCTGGATATGGCACTAGAGTTTGCACTGCACAGAGTCCAATGCTATTGGGAGTCAATACCGTGATGGCAAGAAGTTTTGAGAGAAGTATGGAAGCTGGCACGTTGGGAATGCTTGGTCATAAACGTTGTATGAGTGTTCTCCCAAGTAAAACCAGTGAGACCAGCCCATCTGGTTTTCGCCCGTTATCTCCTCATCTCCCTCTTTATCAGCCCCAACTCTCTTCAACTCTCTCAATTTTTAATAGAATTGCTGGAGCTTTCTTAGCCGGTGTCATTGTCCTTTTTTATATGATATATTTGAAAATGGGTTTGGTTAGCCTCACTTATGACTCATTCTACCAGTTCATATTTTATTCATCAAAACTCAACCTACTTGTCATGGAGCTTTCTGCCTTAGCCGTGACCTACCATCTGTATAGTTTCATTCGTCATTTACGCTTATGA 756 0.4616 MSCLLRSTKSKILSSYSSLSRSFPSLSRAGPSHDLLHNQIGALSPLPNLFHRNTASIPLAKENASSGDLTGLPKVPANKLGCDSNAINSVMYKASGLDTTMRAGAGYGTRVCTAQSPMLLGVNTVMARSFERSMEAGTLGMLGHKRCMSVLPSKTSETSPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVIVLFYMIYLKMGLVSLTYDSFYQFIFYSSKLNLLVMELSALAVTYHLYSFIRHLRL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01102 251 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 99 249 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Spst11g01102 251 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 153 250 IPR034804 GO:0016020
Spst11g01102 251 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 158 249 IPR034804 GO:0016020
Spst11g01102 251 CDD SQR_TypeC_SdhC 164 249 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Spst11g01102 251 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 164 249 IPR000701 GO:0016627
Spst11g01102 251 FunFam Succinate dehydrogenase subunit 3-1, mitochondrial 149 250 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01102 K00236 K03885 gmx:100499683 365.54