Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01100 ATGGCATTCAATCCATCACGTGCTTCTCACGTGATCATCCCTGATAGACATGCCTGGCATTTGCAAGTGGCAATGCCTTCTCTTTCTCTCTCTTGTCTGAACTCAACTGTCTCTTTTGCTGCAACTATGAAGGGCTTGCTCTCTCCCAGTTTCCTTCTTCAAATTACTCTCTTCCTCCGTGTTTTTCTTCTGGTTATGAACAAGTCTGAAGGCTCTCCAATCACTTCTAAGGTTGATGCGCTGCCTCCTGTTCTCCCTCCAACCACACAACCGCAGCCCTTTATTCCTCTTATAGCTCCTTCCCCATTGAGACCTTTCACAAATAATTCTGTGCCCAAGTTATCAGGCCTTTGTTCATTGAATTTCTCTGCTGCTCAAGATATAATGACCACAACTGCTACTGATTGCTGGACATCCTTTGCTCCATATTTGGCAAATGTTGTATGCTGTCCTCAATTTGATGCCATGCTGGTAACACTCATAGGGCAGTCTAGCAAATATTCTGGGGTGCTAGCATTGAACGAAACTCATGCTAGTCACTGCCTCTCTGATGTTCAGAAGGTCCTCGTCAGTCAAGGAGCAAATGAGAACCTAAAAAAAATATGTGCAGTCCATCCAACAAATCTCACTGAGGCCTCTTGTCCCGTTGTATTTGTAGATGAATTTGAGAGTATTGTAGACACTTCAAGACTTCTGACTGCTTGTAGAAAAATCGATCCCGTAAATGAGTGCTGTGATCAAGTTTGCCAAAATGCCATACATTATGCTGCTAGAAAAATTGCCTTGAATGATTTGTCTAATTCAGATGGAAACCATAGCATGTCTGGGCCGACAGCTAGGATCAATGATTGTAAGAATATTGTCCTACGTTGGCTGGCTAGTAAACTTGATGCACCCACTGCAAATAGTGTTTTTAGAGGACTATCAAACTGCAACCTAAACAAAGTATGTCCATTGGTTTTTCCAAGTGTCTCAAGTGTTGTGAAAGAATGCGGGAATCTCATACACAACCAAACAGCTTGCTGCAAAGCCATCAAAAGTTACGTGTCCTATTTGCAAGAACAGAGTTTTGTAACCAATCTTCAAGCCTTGAAATGTGCTGCATCACTTGGAAAGAAGTTGCAGAATGCAAATGTCTCCAAAGACGTTTATAATCTTTGCCATATAAGCCTAAAGGACTTTTCTCTTCAAGAATCTGGTTGCCTTTTGCCGAGTTTGCCTACAAATGCAGTATATGATGGAACTTCAGGGATTGGATTCATTTGTGACCTTAATGACAATATTGTAGCTCCATGGCCCACATCGTCGTATATGCTTTCATCCTCATGCAATAGAACTACAAAGTTTCCATCGCTTCCTACGGCAACATCCTCACAAAATGGTCTTTTCATTAATACACTGGTTTTGCCTCTCCTCTTTACCTCTATACTACTTCCCAAGAGGCTTCTTTAA 1452 0.4187 MAFNPSRASHVIIPDRHAWHLQVAMPSLSLSCLNSTVSFAATMKGLLSPSFLLQITLFLRVFLLVMNKSEGSPITSKVDALPPVLPPTTQPQPFIPLIAPSPLRPFTNNSVPKLSGLCSLNFSAAQDIMTTTATDCWTSFAPYLANVVCCPQFDAMLVTLIGQSSKYSGVLALNETHASHCLSDVQKVLVSQGANENLKKICAVHPTNLTEASCPVVFVDEFESIVDTSRLLTACRKIDPVNECCDQVCQNAIHYAARKIALNDLSNSDGNHSMSGPTARINDCKNIVLRWLASKLDAPTANSVFRGLSNCNLNKVCPLVFPSVSSVVKECGNLIHNQTACCKAIKSYVSYLQEQSFVTNLQALKCAASLGKKLQNANVSKDVYNLCHISLKDFSLQESGCLLPSLPTNAVYDGTSGIGFICDLNDNIVAPWPTSSYMLSSSCNRTTKFPSLPTATSSQNGLFINTLVLPLLFTSILLPKRLL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01100 483 PANTHER GPI-ANCHORED PROTEIN 51 474 IPR040336 -
Spst11g01100 483 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Spst11g01100 483 Pfam SPARK 115 272 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01100 Spst-Chr11 35346513 35352671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01100 - - gmx:100780106 773.081