Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01051 ATGACCACGTTGCTCAATTCCTCTCTCATTTCACATGTAACTTTTGGCAAATCTCAGAAACCGGTAGCCCAAAATCTTTTCCACCGTAGACTAATCCTCCCTCGCTGCAACGCAACCACCACAGACGTTAAAATTTCTGCAAGAAAATCAGCCAACTACCAACCAAACATCTGGAATTACGATTTTCTGCAGTCCTTGAAGCATGCCTACTCGGATATAAAATATGAGGACAGGGCCAACAAGCTGCAAGAGGAAGTGATGAGAATGATAAAGGATGAAAATTCAGATGTATTGCTCAAACTTGAACTCATTAACGATGTGAAACGCTTGGGCCTGAGTTACCATTTTGACAAGGAGATAGGAGAAGCCCTTCTTAGGTGTCACTGTTCTGCAATAACATTTAGTGGCACCATCTATCACAGAGGCTTGCATGAAACTGCTTTGAGCTTCAGGCTTCTGAGAGAATATGGCTATGATGTCACAGCAGATATATTTGAGAGATTTAGAGACCACAATGGTAATTTCAAGGCAAGCCTTGCTAGTGATGTGGAAGGAATGTTGAGTCTGTACGAGGCATCGTTTCTTGGTTATGAAGGAGAACAAATTTTGGATGAAGCCAAGGACTTCAGCAGCTTCCATCTTAGGGTTGCCCTCAATAAAGGTAGAAGTAGTAACATGCTATTAGAACAAGTGAATCATGCTTTGGAGCTTCCACTGCATCATAGAATCCAAAGACTTGAAGCCAGGTGGTATATTGAATCTTACTCTCAAAGAAGAGACTCAAATCTGGTGCTCCTTGAAGCAGCAAAACTGGATTTCAATATTGTGCAGTCAACCCTGCAAAATGATATCCAAGAAATGTCAAGGTGGTGGAAGGGAATGGGACTAGCCTCAAAGTTAAGCTTCAGCCGAGACAGGCTAATGGAATGCTTCTTTTGGACTGTTGGAATGGTGTTCGAGCCTCAGTTCAGCTATCTCCGCAAAGGTTTAACCAAAGTTACTTCTTTAATAACCACGATCGATGACGTTTATGACGTGTATGGCTCCTTAGATGAATTAGAACTTTTTACAGCAGCTGTAGAAAGTTGGGATGTTAAAGCAGTTAAAGTTCTCCCAAATTACATGAAGATATGTTTTCTAGCACTGTACAACACTGTCAATGAATTGGCCTATGATGCAATTAAAGAACAAGGACAAGATATTCTTCCTTACCTCACCAAAGCATGGTCTGATATGTTGAAAGCATTCCTACGAGAAGCCAAATGGAGTCGTGACAAACACGTCCCAAGACTCGATGATTACCTCCAGAATGCATGGGTCTCTGTTTCTGGGGTAGTTATACTGACCCATCTCTATTTCTTGCTAAACCACAGCATAACAAAGGAAGCACTTGTGTCTTTAGACAGCTACCACTCCCTGTTACGGAGGCCATCCATTATTTTTCGACTTTGCAATGATTTGGGTACTTCAAAGGCAGAGTTAGAGAGAGGTGAGGCAGCGAGCTCCATTCTCTGTTACATGCGAGAAAGTGGTGCTAGTGAAGAGGGTGCTTACAAACATATCCATGATTTGCTTAATGAAACGTGGAAGAAGATGAACCAAGATCGAGTGTCAGAGTCTCCTTTCCCAAAACCTTTCGTAGAAGCAGCTATAAACCTTGCAAGAATTTCTCAGTGCACGTACCAGTATGGAGATGGACATGGAGCCCCCGATTCGACGGCCATAGATCGCATTCGATCCTTGATAATTGAACCCATCGCACTTCAGGAGATGCACACATTTCAACAAGTTGTTAATCAATAA 1803 0.4232 MTTLLNSSLISHVTFGKSQKPVAQNLFHRRLILPRCNATTTDVKISARKSANYQPNIWNYDFLQSLKHAYSDIKYEDRANKLQEEVMRMIKDENSDVLLKLELINDVKRLGLSYHFDKEIGEALLRCHCSAITFSGTIYHRGLHETALSFRLLREYGYDVTADIFERFRDHNGNFKASLASDVEGMLSLYEASFLGYEGEQILDEAKDFSSFHLRVALNKGRSSNMLLEQVNHALELPLHHRIQRLEARWYIESYSQRRDSNLVLLEAAKLDFNIVQSTLQNDIQEMSRWWKGMGLASKLSFSRDRLMECFFWTVGMVFEPQFSYLRKGLTKVTSLITTIDDVYDVYGSLDELELFTAAVESWDVKAVKVLPNYMKICFLALYNTVNELAYDAIKEQGQDILPYLTKAWSDMLKAFLREAKWSRDKHVPRLDDYLQNAWVSVSGVVILTHLYFLLNHSITKEALVSLDSYHSLLRRPSIIFRLCNDLGTSKAELERGEAASSILCYMRESGASEEGAYKHIHDLLNETWKKMNQDRVSESPFPKPFVEAAINLARISQCTYQYGDGHGAPDSTAIDRIRSLIIEPIALQEMHTFQQVVNQ 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01051 600 SFLD Terpene Cyclase Like 1 C Terminal Domain - Enzymatic 262 587 - -
Spst11g01051 600 PANTHER OS04G0344100 PROTEIN-RELATED 48 567 - -
Spst11g01051 600 FunFam Isoprene synthase, chloroplastic 241 576 - -
Spst11g01051 600 CDD Terpene_cyclase_plant_C1 48 585 IPR044814 GO:0010333|GO:0016102
Spst11g01051 600 SUPERFAMILY Terpenoid synthases 262 586 IPR008949 -
Spst11g01051 600 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 54 260 IPR008930 -
Spst11g01051 600 Gene3D Farnesyl Diphosphate Synthase 55 573 IPR008949 -
Spst11g01051 600 Pfam Terpene synthase family, metal binding domain 266 531 IPR005630 GO:0000287|GO:0010333|GO:0016829
Spst11g01051 600 FunFam Isoprene synthase, chloroplastic 95 261 - -
Spst11g01051 600 SFLD Isoprenoid Synthase Type I 262 587 - -
Spst11g01051 600 Gene3D - 95 261 IPR036965 GO:0010333|GO:0016829
Spst11g01051 600 Pfam Terpene synthase, N-terminal domain 57 235 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01051 Spst-Chr11 34694679 34698404 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01051 K12742 K19968 gmx:100782452 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01051 11 34694679 34698404 Spst11g01051 11 34694679 34698404 ECH