Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01010 ATGATTTTCGATGAAGGGTCAATGCAATCTAAGTCTAACCTGGACTGCTTCCTCCGCCGTACGACACCTGTTGTTCCGTCTCAGTTTCTTCCCAAGCACGAGATTCGAAACCTTAACCGTTTGTGGCACCCGTGGGAGAGAGAAGCGGTTGAGTACTTCACTTTGGGCGATCTCTGGAATCGGTTCGACGAATGGAGTGCTTATGGAGCTGGAGTTCCCATCTCCTTGTCCAATGGGGAGACACTTGTACAGTACTACGTTCCTTACCTTTCCGCAATTCAAATATTCACCAGCAACACTTTCAGGGAAGAGACAGAATCAGGTGAGTGTGAGACAAGGGATTCGTACAGCGATTCCTACAGTGAAGAGAGTGAGTGTGATAAGCTATGGAGGTGGGATGGAACTTCATCAGAGGAGGGAGGATCTGAGCATGATTGTTTGTGGCACATGAATGACCGCTTGGGTCACCTTTACTTTCAGTATTTTGAAAGATCAACTCCATATGGCAGAGTCCCTCTAATGGATAAGATTACTGGGTTAGCAGAAAGATACCCAGGGTTGATGTCACTAAGAAGTGTAGACCTTTCCCCAGCAAGTTGGATGGCAGTTGCTTGGTATCCCATATATCATATTCCCATGGGGAGAACAATTAAAGATCTCTCAACATGCTTCCTCACTTACCACACACTTTCATCTTCGTTCCAAGATACGGAGGTTGATGATGATGCGGAGGGAGGACAGGAGAAGAGGAAAGAAGGTGAAGGAATTTCGGTGGCAGCATTTGGTTTGGCCACGTATAAGATGCAAGGGAATTTGTGGGTCTCGGGGAATTGTGGTAGGGACCAAGAGAGAATTGTCTCACTGTTGAGCGTGGCAGATTCATGGTTGAAGCAACTAAGGGTCCAACATCATGACTTTAATTACTTCATGGGCGTTCGCCATGGCTACGGCAATTAA 957 0.4671 MIFDEGSMQSKSNLDCFLRRTTPVVPSQFLPKHEIRNLNRLWHPWEREAVEYFTLGDLWNRFDEWSAYGAGVPISLSNGETLVQYYVPYLSAIQIFTSNTFREETESGECETRDSYSDSYSEESECDKLWRWDGTSSEEGGSEHDCLWHMNDRLGHLYFQYFERSTPYGRVPLMDKITGLAERYPGLMSLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQDTEVDDDAEGGQEKRKEGEGISVAAFGLATYKMQGNLWVSGNCGRDQERIVSLLSVADSWLKQLRVQHHDFNYFMGVRHGYGN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01010 318 Pfam Protein of unknown function (DUF789) 12 309 IPR008507 -
Spst11g01010 318 PANTHER T15D22.8 9 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01010 Spst-Chr11 34238815 34241698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01010 - - gmx:100799384 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01010 11 34238815 34241698 Spst11g01010 11 34238815 34241698 ECH
Spst5g00851 5 7859989 7862453 Spst11g01010 11 34238815 34241698 PCT