Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01002 ATGGAGAAGATCCAGCACAGTGAGGTGGAAGTGAAGGGACTGAGGCTGCACGTGGCAGAGATTGGAACTGGCTCCAAGGCAGTGGTATTCTTACATGGATTCCCAGAGATCTGGTACACATGGAGGCACCAGATGATTGCTGTGGCAAACGCTGGTTATAGGGGTGTTGCCTTTGATTTCAGAGGCTATGGACTCTCTGAGCAACCAGTGGAGCCAGAAAGGGAAACCATGTTTGATTTGGTTCATGAAATTGTGGGTCTTTTGGATGCTTTAAACATCGCCAAGGCTTTTCTAGTTGGGAAGGACTTTGGTGCCATCCCAGGATATCTTACAACTGCAGTGCATCCAGAAAGAGTTGCTGGTATCATAACTTTAGGCATTCCTTTCATGCTTCCAGGTCCCTCTGCAGTGCAGAGCCACCTTCTGCTCCCCAAAGGGTTTTATATTACTAGGTGGCGGGAGCCTGGGAGGGCAGAAGCAGATTTTGGGCGCTTTCCTGTGAAATCCGTGATAAGGAACATCTACACTCTCTTCTCTAGAAGTGAGGTTCCAATAGCAGCTGAGGATCAAGAAATCATGGACTTGTTCAACCCATCTACTCCTCTACCACCATGGTTCTCTGAGGAAGACCTTGCAACCTATGCATCTTTATATGAAAAATCTGGATTCAGATATGCATTGCAGGTTCCGTACAGGAGTATCGATGTGGATGCTGGCTTAAGTGATGTAAAAGTTACTATTCCATCACTTCTGATTGTGGGTGAGAAAGATTATGTGCTCAAGTTTCCAGGCATGGAGGACTATATTCGAAGTGGGGCAGTGAAAAACTTTGTGCCTGACTTGGAAATAGTATATATTCCAGAAGGAAGCCATTTTGTGCCAGAGCAAATTCCAGAGAAGGTGAATCAGCTTATCATTGAGTTCCTTGATAAACAAAGTATCTGA 945 0.455 MEKIQHSEVEVKGLRLHVAEIGTGSKAVVFLHGFPEIWYTWRHQMIAVANAGYRGVAFDFRGYGLSEQPVEPERETMFDLVHEIVGLLDALNIAKAFLVGKDFGAIPGYLTTAVHPERVAGIITLGIPFMLPGPSAVQSHLLLPKGFYITRWREPGRAEADFGRFPVKSVIRNIYTLFSRSEVPIAAEDQEIMDLFNPSTPLPPWFSEEDLATYASLYEKSGFRYALQVPYRSIDVDAGLSDVKVTIPSLLIVGEKDYVLKFPGMEDYIRSGAVKNFVPDLEIVYIPEGSHFVPEQIPEKVNQLIIEFLDKQSI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01002 314 SUPERFAMILY alpha/beta-Hydrolases 2 311 IPR029058 -
Spst11g01002 314 PRINTS Epoxide hydrolase signature 112 125 IPR000639 GO:0003824
Spst11g01002 314 PRINTS Epoxide hydrolase signature 32 50 IPR000639 GO:0003824
Spst11g01002 314 PRINTS Epoxide hydrolase signature 247 263 IPR000639 GO:0003824
Spst11g01002 314 PRINTS Epoxide hydrolase signature 286 308 IPR000639 GO:0003824
Spst11g01002 314 PRINTS Epoxide hydrolase signature 52 67 IPR000639 GO:0003824
Spst11g01002 314 PRINTS Epoxide hydrolase signature 98 111 IPR000639 GO:0003824
Spst11g01002 314 Gene3D alpha/beta hydrolase 1 313 IPR029058 -
Spst11g01002 314 Pfam alpha/beta hydrolase fold 27 261 IPR000073 -
Spst11g01002 314 PANTHER EPOXIDE HYDROLASE 5 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01002 Spst-Chr11 34157617 34159793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01002 4 313 Acyl Lipid Metabolism Gene Families AT3G51000 37.107 7.43e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01002 - - gmx:100802931 597.816