Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01001 ATGGAGAAGATCCAGCACAGTGAGGTGGAAGTGAAGGGACTGAAGCTGCATGTGGCAGAGATTGGAACTGGCTCCAAGGCAGTAGTATTCTTACATGGATTCCCAGAGATCTGGTACACATGGAGGCACCAGATGATTGCTGTGTCAAACGCTGGTTACAGGGCTATTGCCTTTGATTTCAGAGGCTATGGACTCTCTGAGCAACCAGCGGATCCAGAAAAGGAAACCATGTATGACCTAGTTGATGAAATAGTGGGTCTTTTGGATGCCTTACACATCACCAAAGCTTTCCTAGTTGGCAAGGATTTTGGGGCAATCCCTGCATATCTTACAGCAGTTGTGCACCCAGAAAGAGTAGGTGCTGTCATAACTTTAGGCGTTCCTTTCTTGCCTCCTGGTCCCTCTGCTATCCAAAATAACCTTCTCCCCGAAGGCTTCTACATTACTAGGTGGCAGGAGCCTGGGAGGGCAGAAGCAGATTTTGGGCGCTTTCCTGTGAAATCCGTGATAAGGAACATCTACACTCTCTTCTCTAGAAGTGAGGTTCCAATAGCAGCTGAGGATCAAGAAATCATGGACTTGTTCAACCCATCTACTCCTCTACCACCATGGTTCTCTGAGGAAGACCTTGCAACTTATGCATCTTTATATGAAAAATCTGGATTCAGATATGCATTGCAGGTTCCTTACAGGAGTCTGAAAGTGGACACTGGCTTAAGTGACGTGACGGTTACAAAACCAGCACTTCTGATCATGGGTGAGAAAGATTATGTTTTCAAGTTTCCAGGCATGGAGGACTATATTCGAAGCGGAACAGTGAAAAACTTTGTGCCTGAATTAGAAATCACTTATATTCCAGAAGGAAGCCATTTTGTGCATGAACAAATTCCAGACAAGGTGAACCAGCTCATCATTGAGTTCATCGACAAACAAAGTATCTGA 942 0.4512 MEKIQHSEVEVKGLKLHVAEIGTGSKAVVFLHGFPEIWYTWRHQMIAVSNAGYRAIAFDFRGYGLSEQPADPEKETMYDLVDEIVGLLDALHITKAFLVGKDFGAIPAYLTAVVHPERVGAVITLGVPFLPPGPSAIQNNLLPEGFYITRWQEPGRAEADFGRFPVKSVIRNIYTLFSRSEVPIAAEDQEIMDLFNPSTPLPPWFSEEDLATYASLYEKSGFRYALQVPYRSLKVDTGLSDVTVTKPALLIMGEKDYVFKFPGMEDYIRSGTVKNFVPELEITYIPEGSHFVHEQIPDKVNQLIIEFIDKQSI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01001 313 PANTHER EPOXIDE HYDROLASE 5 310 - -
Spst11g01001 313 Gene3D alpha/beta hydrolase 1 312 IPR029058 -
Spst11g01001 313 Pfam alpha/beta hydrolase fold 27 264 IPR000073 -
Spst11g01001 313 PRINTS Alpha/beta hydrolase fold signature 112 125 IPR000073 -
Spst11g01001 313 PRINTS Alpha/beta hydrolase fold signature 98 111 IPR000073 -
Spst11g01001 313 PRINTS Alpha/beta hydrolase fold signature 52 67 IPR000073 -
Spst11g01001 313 SUPERFAMILY alpha/beta-Hydrolases 2 310 IPR029058 -
Spst11g01001 313 PRINTS Epoxide hydrolase signature 32 50 IPR000639 GO:0003824
Spst11g01001 313 PRINTS Epoxide hydrolase signature 246 262 IPR000639 GO:0003824
Spst11g01001 313 PRINTS Epoxide hydrolase signature 285 307 IPR000639 GO:0003824
Spst11g01001 313 PRINTS Epoxide hydrolase signature 52 67 IPR000639 GO:0003824
Spst11g01001 313 PRINTS Epoxide hydrolase signature 112 125 IPR000639 GO:0003824
Spst11g01001 313 PRINTS Epoxide hydrolase signature 98 111 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01001 Spst-Chr11 34150638 34152440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01001 1 310 Acyl Lipid Metabolism Gene Families AT4G02340 37.188 1.95e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01001 - - gmx:100812544 575.089