Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00981 ATGGTGGCTGGAAATGGTTTGTTTTACCCCGTTGTGGGCTTTGCATCGATCGTGTTGTTCATATACATGTCGTTTGGGGACGTGCGGTTTGGTTTTGAGGAAGAAGTGGAATTGGCTTTTGTGGAGAGAAATGGAACTCAGTTTATGGTGGATGGAAAGGCCTTCTACATTAATGGGTGGAACTCTTACTGGTTAATGGTGCAATCTGTGGATGAGTATTCCAGGCCAAGGGTGCGTGAAATGCTGAAGGCTGGGGCCAAGATGGGGCTCACCGTGTGTAGAACTTGGGCTTTCAATGATGGTGACTATAATGCCCTTCAGAGTTCTCCTGGTGTGTTCAATGAACAAGCTTTCAAGGCCTTGGACTATGTTATAGCAGAAGCAAGGCAACATGGAATTAGGCTGCTCCTTAGCTTAGTAAATAACTTGCATGCATATGGTGGGAAGACTCAATATGTCAAATGGGCATGGCAAGAAGGGGTAGGACTAAGCTCGTCTAATGATTCTTTCTTCTTTGATCCATCAATCCGCAGTTATTTCAAGAATTATATCAAGACAATTCTGACAAGGAAGAATACTATCAATGGAATTGAATATAGAAATGACCCCACCATTTTTGGTTGGGAGTTAATTAATGAACCTCGGTGCATAACTGATCCTTCCGGTGACACTCTCCAAGATTGGATAGAGGAAATGTCAGCTTTTGTCAAATTGATCGACAAGCGCCATCTTGTGACGATTGGACTCGAAGGTTTTTATGGTCCTAATGATCCGAAAAGATTGACAGTGAACCCTGAGGAGTGGGCATCTCGACTTGGATCTGATTTTATAAGGAACTCAAACATCTCAAACATTGACTTCACCTCTGTCCATATCTATCCTGATCACTGGTTTCATGAGCAGGTATTTGAAGACTACATGAAATTTGTTTCCAAGTGGATGCTTTCTCACATTGAAGATGGTGATAAGGTACTGAACAAGCCAGTTGTGTTCTCTGAATATGGATTGTCAGACATAAATTTTACAATGTCCGAACGGAAAACAATGTACAAAACAATTTTAGACATATCCTACAAATCTGCAAAGAAAAACCGGTCTGGAGCAGGTGCTCTAGTTTGGCAATTCTTGGTGGGAGGAATGCAGGAATTTACAGATGATTTTGGGATCATCCCTTGGGAAAAGACACCAATCCCTTCACTATTTGTTGAACAATCATGCAGATTAGCCAAGGTCAAGGGATGGCCTCACAAGGACACAAGTTTCAAACAATTTTGTTAG 1278 0.4194 MVAGNGLFYPVVGFASIVLFIYMSFGDVRFGFEEEVELAFVERNGTQFMVDGKAFYINGWNSYWLMVQSVDEYSRPRVREMLKAGAKMGLTVCRTWAFNDGDYNALQSSPGVFNEQAFKALDYVIAEARQHGIRLLLSLVNNLHAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRSYFKNYIKTILTRKNTINGIEYRNDPTIFGWELINEPRCITDPSGDTLQDWIEEMSAFVKLIDKRHLVTIGLEGFYGPNDPKRLTVNPEEWASRLGSDFIRNSNISNIDFTSVHIYPDHWFHEQVFEDYMKFVSKWMLSHIEDGDKVLNKPVVFSEYGLSDINFTMSERKTMYKTILDISYKSAKKNRSGAGALVWQFLVGGMQEFTDDFGIIPWEKTPIPSLFVEQSCRLAKVKGWPHKDTSFKQFC 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00981 425 SUPERFAMILY (Trans)glycosidases 40 403 IPR017853 -
Spst11g00981 425 PANTHER - 9 417 IPR045053 GO:0004553
Spst11g00981 425 Gene3D Glycosidases 37 412 - -
Spst11g00981 425 FunFam Mannan endo-1,4-beta-mannosidase 6 37 412 - -
Spst11g00981 425 Pfam Cellulase (glycosyl hydrolase family 5) 73 374 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00981 Spst-Chr11 34026740 34029981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00981 3 425 Glycoside Hydrolase AT2G20680 69.412 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00981 K19355 - gmx:100811461 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00981 11 34026740 34029981 Spst11g00981 11 34026740 34029981 ECH