Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00974 ATGGAGCTCACTATAACGCAACCTGATGATTGGCATCTTCACCTCCGTGATGGTTCTCTTCTTGAAGCTGTCCTCCCTGACAGTGCTAAGCATTTTGGAAGGGCTATAGTAATGCCAAATTTGAAACCACCCATCACTACCACGTCTGCTGCTGTCACTTATCGAGGGTCCATTTTGAGAGCAGTACCTAAAAATAGCAACTTCACTCCTCTCATGACACTTTACCTCACAGACATGACTACGCCTGACGAGATTAAACTTGCAAAAAAAAGTGGACTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCTACTACGAATTCCCAGGATGGTGTTACAGATCTTTTGGGAAATTGTTTTTCTGTTCTCAAGGAAATGGCTGAACAAAATTTACCATTATTGGTTCATGGAGAGGTTACAAATTCAGACATAGATATTTTTGACCGAGAAAAGGTCTTTATTGAATCAATTTTGGAGCCTTTAGTTCAGAGGCTTCCACAGTTGAAGGTTGTAATGGAGCACATTACTACCGCAGATGCTGTTAAATTTGTAGAGTCTTGTAAAGAGGGTTACGTAGCTGCAACTGTAACACCACAACATCTTCTTCTGAATCGTAATGCTTTGTTCCAAGGTGGCTTACAGCCTCACAATTACTGCCTTCCAGTGCTCAAAAGAGAGATCCATAGACAGGCTATTGTTTCGGCTGTTACTAGTGGAAGTAAACGATTTTTCCTTGGAACTGATAGTGCTCCACATGAGAGGCGTAAAAAGGAATCTTCATGTGGATGTGCTGGCATATACAACTCCCCAGTAGCTCTATCACTATATGCCAAAGTTTTTGAAGAGGCCGGTGCACTTGATAAGTTGGAGGCTTTTACAAGCTTTAATGGACCTGACTTCTATGGCCTCCCTAGAAATAAGTCAAAGATTAAACTGAGAAAAGCTTCTTGGAAAGTACCTGATTATTTGTCATTTCCAGTTGGAGACATTGTTCCCATGTTTGCTGGTGAAACCCTTGAATGGGAGGCATTGCCTTGTTGA 1041 0.4179 MELTITQPDDWHLHLRDGSLLEAVLPDSAKHFGRAIVMPNLKPPITTTSAAVTYRGSILRAVPKNSNFTPLMTLYLTDMTTPDEIKLAKKSGLVYGVKLYPAGATTNSQDGVTDLLGNCFSVLKEMAEQNLPLLVHGEVTNSDIDIFDREKVFIESILEPLVQRLPQLKVVMEHITTADAVKFVESCKEGYVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGSKRFFLGTDSAPHERRKKESSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKSKIKLRKASWKVPDYLSFPVGDIVPMFAGETLEWEALPC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00974 346 FunFam Dihydroorotase 1 344 - -
Spst11g00974 346 Gene3D - 1 343 - -
Spst11g00974 346 SUPERFAMILY Metallo-dependent hydrolases 2 342 IPR032466 -
Spst11g00974 346 Pfam Amidohydrolase family 10 319 IPR006680 GO:0016787
Spst11g00974 346 PANTHER DIHYDROOROTASE 1 342 IPR004721 GO:0004151|GO:0019856
Spst11g00974 346 Hamap Dihydroorotase [pyrC]. 1 344 IPR004721 GO:0004151|GO:0019856
Spst11g00974 346 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Spst11g00974 346 CDD DHOase 3 341 IPR004721 GO:0004151|GO:0019856
Spst11g00974 346 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
Spst11g00974 346 PIRSF Dihydroorotase 1 345 IPR004721 GO:0004151|GO:0019856
Spst11g00974 346 NCBIfam dihydroorotase, homodimeric type 2 342 IPR004721 GO:0004151|GO:0019856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00974 K01465 - gmx:100815210 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00974 11 33980479 33984027 Spst11g00974 11 33980479 33984027 ECH