Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00867 ATGGGTTTCCATTTGCGTTCTATTCGACGGGCATCATTAACAGCTAGCCCAGCAGCATCAAAATCAGAACAAGTCCCAAAGGGTTATCTTGCAGTCTATGTTGGAGAGAATCAAAAGCGGTTTGTGATTCCCATATCATACTTGAATCAACCTTCATTCCAAGACTTGCTGAGTCAAGCTAAAGAAGAGTTTGGATACGATCATCCGATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTTTTCCAACATATTACTTGCCTCTTGAATAGATAA 276 0.4203 MGFHLRSIRRASLTASPAASKSEQVPKGYLAVYVGENQKRFVIPISYLNQPSFQDLLSQAKEEFGYDHPMGGLTIPCSEDVFQHITCLLNR 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00867 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 87 IPR003676 GO:0009733
Spst11g00867 91 Pfam Auxin responsive protein 13 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00867 Spst-Chr11 32772436 32772711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00867 24 90 Calmodulin-binding Proteins AT3G43120 50.000 2.04e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00867 K14488 - gmx:106798972 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00867 11 32772436 32772711 Spst11g00867 11 32772436 32772711 ECH