Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00835 ATGTGCCTCTGGCTCATTACACCTGAGAAACATGAGAAGTGGATGGCACAGTATGGCAAGGCTTACAAGGATGCTGCTGAGAAGGAAAAACGTTTCCAAATATTCAAGAACAATGTGCAGTTCATTGAGTCTTTCAATGCTGCTGGGGACAAACCTTTCAACCTTAGCATTAACCAATTTGCGGATCTGCATAATGAAGAATTTAAGGCTTTGTTAATTAATGGTCAGAAGAAGGCACGTAGCATGGGGACAGCAACAGTAACATCGTTTAAGTATGACAGTGTAACTCAGATTCCTGAAACCATGGACTGGAGGAAAAGAGGTGCTGTTACTCCAATCAAGGACCAAGGCACATGTCGTAGTTGTTGGGCATTTTCAACTGTGGCTACAATCGAGGGTCTCCACCAAATAACAACAGGTGAATTGGTGTCCCTGTCAGAGCAAGAACTAGTAGATTGTGTGAAAGGTGGGAGTGAAGGATGCCACGGTGGTTATGTGGAAGATGCCTTTGAATTCATTGCCAAGAAAGGTGGAATAGCGAGTGAAACACATTATCCTTACAAAGGAAAAGATAGAAGTTGTGGGGTTAAGGAGACTCATCATGGTGTTGCTCGGATTAAAGGGTATGAGAAAGTTCCTGCTAATAGTGAAAAGGCATTACTGAAAGCTGTGGCAAATCAACCAGTGTCAGTTTACATTGATGCTGGAGGACGTGCTTTTCAATTTTACTACAGTGGAATTTTCACAGGAAAATGTGGAACTGATCCTGACCATGCTGCAACAGTAGTTGGTTATGGTAAAGTTCATGATGGAACTAAGTATTGGCTAGTAAAAAATTCATGGAGCAGTGAATGGGGTGAGAAAGGGTACATGAGGATGAAGAGAAACATAAATGCCAAGAAAGGCTTATGCGGAATTGCTGCAAATGGCTCTTATCCTATTGCTTAA 948 0.4209 MCLWLITPEKHEKWMAQYGKAYKDAAEKEKRFQIFKNNVQFIESFNAAGDKPFNLSINQFADLHNEEFKALLINGQKKARSMGTATVTSFKYDSVTQIPETMDWRKRGAVTPIKDQGTCRSCWAFSTVATIEGLHQITTGELVSLSEQELVDCVKGGSEGCHGGYVEDAFEFIAKKGGIASETHYPYKGKDRSCGVKETHHGVARIKGYEKVPANSEKALLKAVANQPVSVYIDAGGRAFQFYYSGIFTGKCGTDPDHAATVVGYGKVHDGTKYWLVKNSWSSEWGEKGYMRMKRNINAKKGLCGIAANGSYPIA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00835 315 PRINTS Papain cysteine protease (C1) family signature 116 131 IPR000668 GO:0006508|GO:0008234
Spst11g00835 315 PRINTS Papain cysteine protease (C1) family signature 274 280 IPR000668 GO:0006508|GO:0008234
Spst11g00835 315 PRINTS Papain cysteine protease (C1) family signature 258 268 IPR000668 GO:0006508|GO:0008234
Spst11g00835 315 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 10 308 IPR013128 GO:0008234
Spst11g00835 315 SMART pept_c1 98 314 IPR000668 GO:0006508|GO:0008234
Spst11g00835 315 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 274 293 IPR025661 -
Spst11g00835 315 Gene3D Cysteine proteinases 7 315 - -
Spst11g00835 315 Pfam Cathepsin propeptide inhibitor domain (I29) 11 68 IPR013201 -
Spst11g00835 315 Pfam Papain family cysteine protease 98 314 IPR000668 GO:0006508|GO:0008234
Spst11g00835 315 FunFam Senescence-specific cysteine protease SAG39 5 315 - -
Spst11g00835 315 SMART Inhibitor_I29_2 11 68 IPR013201 -
Spst11g00835 315 CDD Peptidase_C1A 99 313 IPR039417 -
Spst11g00835 315 SUPERFAMILY Cysteine proteinases 9 314 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00835 Spst-Chr11 32491844 32493041 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00835 - - gmx:100817009 530.406