Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00834 ATGTCTCGCAGGTTGCCTGAGGCCTTTTCGTCAGAGAGACATGAGACGTGGATGGCACAGTATGGTAAGGTCTATAAGGATGATGCTGAGAAGGAGAAACGTTTCCAAATATTCAAAAACAATGTGCAGTTCATTGAGTCTTTCAATGCTGCTGGGGGAAAACCTTTCAACCTTAGCATTAACCGATTTGCTGACCTTCATAACGACGAATTTAAGGCTTTACTAATTAATGGTCAGAAGAAGGAACGTGGCGTGTGGACGGCATCAAAAACATCGTTTAGGTTTGACAGTGTCACTAAGATTCCTGCTACCATGAACTGGAGGAAAAGAGGTGCTGTTACTCCAGTCAAGGACCAAGGCACATGTCGAAGTTGTTGGGCATTTTCAACTGTGGCTACAATCGAGGGTCTCCATCATATAATTAAAGGTGAATTAGTGTCCCTATCAGAACAAGAACTGGTAGATTGTGTTAGAGGTGACAGTGACGGATGCATTGGTGGTTATGCGGAAGATGCCTTTGAATTTATTGCTAAGAAAGGAGGAATATCAAGTGAAACATACTACCCCTACAAAGGAGTTAACAGGACTTGTAAGGTTAAGAAGGAAAGTCATGGTGTAGCTCAGATTAAAGGGTATGAGAAAGTTCCTGTTAATAGTGAAAAGGCACTCCTGAAAGCTGTGGCACATCAACCAGTGTCAGCTTATGTTGAAGCTGGAGGATCTGCTTTCCAGTTTTACTCTAGTGGGATTTTTACAGGAAAGTGTGGAACTGACACTGATCATTCTGTTACAGTGGTTGGTTATGGAGAAGCTGGTGATGGAACCAAGTATTGGCTAGTGAAGAATTCATGGGGAACTGAATGGGGTGAGAAAGGGTATATAAGGATGAAGAGAGATATACATGCCAAGGAAGGTTTATGTGGAATTGCTACCAGTGCCTTATATCCAACTGTTTGA 957 0.4242 MSRRLPEAFSSERHETWMAQYGKVYKDDAEKEKRFQIFKNNVQFIESFNAAGGKPFNLSINRFADLHNDEFKALLINGQKKERGVWTASKTSFRFDSVTKIPATMNWRKRGAVTPVKDQGTCRSCWAFSTVATIEGLHHIIKGELVSLSEQELVDCVRGDSDGCIGGYAEDAFEFIAKKGGISSETYYPYKGVNRTCKVKKESHGVAQIKGYEKVPVNSEKALLKAVAHQPVSAYVEAGGSAFQFYSSGIFTGKCGTDTDHSVTVVGYGEAGDGTKYWLVKNSWGTEWGEKGYIRMKRDIHAKEGLCGIATSALYPTV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00834 318 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 259 269 IPR025660 -
Spst11g00834 318 Pfam Papain family cysteine protease 101 316 IPR000668 GO:0006508|GO:0008234
Spst11g00834 318 Pfam Cathepsin propeptide inhibitor domain (I29) 14 71 IPR013201 -
Spst11g00834 318 CDD Peptidase_C1A 102 316 IPR039417 -
Spst11g00834 318 SUPERFAMILY Cysteine proteinases 12 317 IPR038765 -
Spst11g00834 318 Gene3D Cysteine proteinases 6 318 - -
Spst11g00834 318 PRINTS Papain cysteine protease (C1) family signature 261 271 IPR000668 GO:0006508|GO:0008234
Spst11g00834 318 PRINTS Papain cysteine protease (C1) family signature 277 283 IPR000668 GO:0006508|GO:0008234
Spst11g00834 318 PRINTS Papain cysteine protease (C1) family signature 119 134 IPR000668 GO:0006508|GO:0008234
Spst11g00834 318 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 12 315 IPR013128 GO:0008234
Spst11g00834 318 FunFam Senescence-specific cysteine protease SAG39 1 318 - -
Spst11g00834 318 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 277 296 IPR025661 -
Spst11g00834 318 SMART Inhibitor_I29_2 14 71 IPR013201 -
Spst11g00834 318 SMART pept_c1 101 317 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00834 Spst-Chr11 32488924 32489975 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00834 - - gmx:100817009 564.688