Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00831 ATGTCCCGCAACCTCCATGATGCATCCATGGTTGAAAGACATGAACAATGGATGAAAAAATATGGTAAACTATATAAGGATGCTGTTGAGAAGGAAAAACGTTTCCTCGTATTCAAGGACAATGTTCAATTCATTGAATCTTTCAATGCTGCTGGGAACAAACCGTACAAGCTTGGCATCAATCACCTAGCTGACCAAACCAATGAGGAATTTATTGCTTCCCATAATGGATACAAGAGATCGCATGAGTTGAGAATAACAACACAAACACCATTTAAGTATGAAAACGTTACTGATATTCCTACTGCAGTGGATTGGAGGCAAAATGGAGCTGTTACTCCAATCAAGGACCAAGGCCAATGTGGTAGCTGCTGGGCATTTTCAACAGTTGCTGCAACAGAAGGTATCTACCAGATAACTACAGGTAAGCTAGTGTCCCTCTCAGAGCAAGAGTTAGTGGATTGTGACAGTGTGGATCATGGATGTGATGGAGGTCTCATGGAAGATGGCTTCGAATTCATTATAAAAAATGGTGGAATCACCACTGAGGCAAACTACCCCTACACTGGAGTTAACGAAACTTGTGACACAAACAAGGAGGCTTCTCCTGAAGCTCAAATAAAAGGGTATGAAACAGTACCTGCTAATAGTGAGGAAGCGTTACAGAAAGCTGTGGCAAACCAACCAGTGTCGGTTTCCATTGATGCTGGAGGATCTTCTTTCCAATTTTACTCAAGTGGGGTTTTCACAGGGCAATGTGGAACTCAACTAGACCATGGTGTTACTGCAGTTGGTTATGGTAGCACCGATAATGGTACTGAATATTGGATAGTGAAGAATTCATGGGGTACAGAATGGGGTGAAGAAGGATACGTAAGAATGGAACGAGGCATAGATGCCAAAGAAGGTCTATGTGGCATTGCAATGGATGCCTCATACCCAATTGCTTAA 951 0.4238 MSRNLHDASMVERHEQWMKKYGKLYKDAVEKEKRFLVFKDNVQFIESFNAAGNKPYKLGINHLADQTNEEFIASHNGYKRSHELRITTQTPFKYENVTDIPTAVDWRQNGAVTPIKDQGQCGSCWAFSTVAATEGIYQITTGKLVSLSEQELVDCDSVDHGCDGGLMEDGFEFIIKNGGITTEANYPYTGVNETCDTNKEASPEAQIKGYETVPANSEEALQKAVANQPVSVSIDAGGSSFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDNGTEYWIVKNSWGTEWGEEGYVRMERGIDAKEGLCGIAMDASYPIA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00831 316 SMART Inhibitor_I29_2 14 71 IPR013201 -
Spst11g00831 316 SUPERFAMILY Cysteine proteinases 6 315 IPR038765 -
Spst11g00831 316 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 275 294 IPR025661 -
Spst11g00831 316 FunFam Senescence-specific cysteine protease SAG39 1 316 - -
Spst11g00831 316 SMART pept_c1 100 315 IPR000668 GO:0006508|GO:0008234
Spst11g00831 316 CDD Peptidase_C1A 101 314 IPR039417 -
Spst11g00831 316 PRINTS Papain cysteine protease (C1) family signature 118 133 IPR000668 GO:0006508|GO:0008234
Spst11g00831 316 PRINTS Papain cysteine protease (C1) family signature 275 281 IPR000668 GO:0006508|GO:0008234
Spst11g00831 316 PRINTS Papain cysteine protease (C1) family signature 259 269 IPR000668 GO:0006508|GO:0008234
Spst11g00831 316 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 118 129 IPR000169 -
Spst11g00831 316 Gene3D Cysteine proteinases 2 316 - -
Spst11g00831 316 Pfam Cathepsin propeptide inhibitor domain (I29) 14 71 IPR013201 -
Spst11g00831 316 Pfam Papain family cysteine protease 100 315 IPR000668 GO:0006508|GO:0008234
Spst11g00831 316 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 257 267 IPR025660 -
Spst11g00831 316 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 5 309 IPR013128 GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00831 Spst-Chr11 32460789 32461840 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00831 - - gmx:100807398 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00831 11 32460789 32461840 Spst11g00831 11 32460789 32461840 ECH