Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00830 ATGTTTGCCATATTCCTCCTCCTTGCAGTTGGGATTTCCGAAGTCACGTGCCGCAAAATGCATGAGACATCCTTGAGAGAAAGACATGAAGAATGGATGGTAAGATATGGCAAAGTGTATACGGATGCTGCAGAGAAGGAAAAACGTTTCCTCATATTCAAGGACAATGTGGAGTTCATTGAATCATTCAATGCTGCTGCCAACAAACCTTACCAGCTTGGTGTTAATCACCTTGCTGACCTCACACTTGAGGAATTCACGGCTTCACGTACTGGACTGAAGATTCCTCGTGAGTTGAGCAAAACACCATTTAAGTATGAAAAGGTCTCTGATATTCCTGAAGCTATAGACTGGAGGGCAAAAGGAGCTGTTCTTCCAGTCAAAGACCAAGGTTTCTGTGGGAGCTGCTGGGCGTTTTCAGCCGTGGGAGCAATTGAGGGTATCAACAAAATAAGCACAGGTACTCTTGTGTCCCTTTCAGAGCAAGAGTTAGTGTCTTGTGACACAAAAGGTAGAGATGGAGGGTGTGCAGGTGGTTACATGGAAGATGCATTTGAATTCGTCATAAAAAATGGTGGAATCGCCAGTGAGGCTAGCTATCCCTACAAGGCCGTTGATGGGAAATGTGACACAGCAGCACCCGCAGTGGTTAAAATCAAGGGGTATGAGAAAGTTCCTCCCAACAGTGAGGATGCACTCAAGAAGGCTGTGGCCAACCAACCAGTGTCAGTTTCCCTTGATGCAGAAAGTAGAGATTTCATGCTCTATGCAAGTGGGGTTTTCACAGGACAATGTGGAACTGAGCTAGACCATGCTGTTACTGCAGTGGGTTATGGCACAGAAAATGGCACTGACTATTGGCTATTGAAGAATTCATGGAGCACAGATTGGGGTGACAAAGGATACATAAAGATGCAACGAGGTATAGCTGCAAAAAGTGGTTTATGTGGAATTGCCATGGATGCATCTTATCCAACGGTTTGA 984 0.4522 MFAIFLLLAVGISEVTCRKMHETSLRERHEEWMVRYGKVYTDAAEKEKRFLIFKDNVEFIESFNAAANKPYQLGVNHLADLTLEEFTASRTGLKIPRELSKTPFKYEKVSDIPEAIDWRAKGAVLPVKDQGFCGSCWAFSAVGAIEGINKISTGTLVSLSEQELVSCDTKGRDGGCAGGYMEDAFEFVIKNGGIASEASYPYKAVDGKCDTAAPAVVKIKGYEKVPPNSEDALKKAVANQPVSVSLDAESRDFMLYASGVFTGQCGTELDHAVTAVGYGTENGTDYWLLKNSWSTDWGDKGYIKMQRGIAAKSGLCGIAMDASYPTV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00830 327 Gene3D Cysteine proteinases 11 327 - -
Spst11g00830 327 Pfam Papain family cysteine protease 112 326 IPR000668 GO:0006508|GO:0008234
Spst11g00830 327 SMART pept_c1 112 326 IPR000668 GO:0006508|GO:0008234
Spst11g00830 327 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 130 141 IPR000169 -
Spst11g00830 327 PRINTS Papain cysteine protease (C1) family signature 286 292 IPR000668 GO:0006508|GO:0008234
Spst11g00830 327 PRINTS Papain cysteine protease (C1) family signature 130 145 IPR000668 GO:0006508|GO:0008234
Spst11g00830 327 PRINTS Papain cysteine protease (C1) family signature 271 281 IPR000668 GO:0006508|GO:0008234
Spst11g00830 327 FunFam Senescence-specific cysteine protease SAG39 10 327 - -
Spst11g00830 327 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 16 320 IPR013128 GO:0008234
Spst11g00830 327 SMART Inhibitor_I29_2 29 86 IPR013201 -
Spst11g00830 327 SUPERFAMILY Cysteine proteinases 20 326 IPR038765 -
Spst11g00830 327 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 286 305 IPR025661 -
Spst11g00830 327 Pfam Cathepsin propeptide inhibitor domain (I29) 29 86 IPR013201 -
Spst11g00830 327 CDD Peptidase_C1A 113 325 IPR039417 -
Spst11g00830 327 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 269 279 IPR025660 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00830 Spst-Chr11 32453903 32455443 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00830 - - gmx:100802616 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00830 11 32453903 32455443 Spst11g00830 11 32453903 32455443 ECH