Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00829 ATGTCCCGCAAGCTGCATGAAACATCCTTGAGAGAAAGACATGAACAATGGATGACAGAATGTGGCAAACTGTATAAGGATGCTGCAGAGAAGGAAAAACGTTTCCAGATATTCAAGGACAATGTGAAGTTCATTGAATCGTTCAATGCTGCTGGCAACAAACCTTACAAGCTTGGTGTTAATCACTTTGCTGACCTCACAGTTGAGGAATTCAAGGCTTTCCGTAATGGATTCAAGAGGTCTCACGAGTTTAGCACAACACAATTTAAGTATGAAAATGTGACTGCTATTCCTGCAGCCATAGACTGGAGGAAAAAAGGAGCTGTTACTCCAATAAAAAACCAAGGACAATGTGGAAGCTGTTGGGCATTTTCAACTGTGGCTGCAACCGAGGGTATCCACCAAATAGCCACAGGGAAACTAGTCTCCCTCTCAGAGCAAGAGCTAGTGGACTGTGACACAAAGGGTGTGGACCAAGGGTGTGAAGGGGGTTACATGGAAGATGGGTTTGAATTCATTATAAAAAATGGTGGAATCACCAGTGAGGCAAACTACCCCTACAAGGCAGTTGATGGCACTTGCGACAAAGGAACCTCCCCAGTGGCTCAAATTAAGGGGTATGAGAAGGTTCCTTCCAATAGTGAGAAGGCACTGCAGCAAGCTGTGGCTAACCAACCCGTGTCAGTTTCTATTGATGCAAATGGTGCAGGTTTCATGTTCTACTCTAGTGGAATTTACTCAGGAGAATGTGGCACTGAACTAGACCATGGTGTTACTGCAGTGGGTTATGGCACTGCTAATGGAACTGAGTATTGGTTAGTGAAGAATTCATGGGGCACTGAATGGGGTGAGGAAGGATATGTGAGGATGCAGAGAGGTATAGCTGCCAAACATGGTTTATGTGGAATTGCCTTGGATTCATCTTATCCAACTGCATGA 939 0.4473 MSRKLHETSLRERHEQWMTECGKLYKDAAEKEKRFQIFKDNVKFIESFNAAGNKPYKLGVNHFADLTVEEFKAFRNGFKRSHEFSTTQFKYENVTAIPAAIDWRKKGAVTPIKNQGQCGSCWAFSTVAATEGIHQIATGKLVSLSEQELVDCDTKGVDQGCEGGYMEDGFEFIIKNGGITSEANYPYKAVDGTCDKGTSPVAQIKGYEKVPSNSEKALQQAVANQPVSVSIDANGAGFMFYSSGIYSGECGTELDHGVTAVGYGTANGTEYWLVKNSWGTEWGEEGYVRMQRGIAAKHGLCGIALDSSYPTA 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00829 312 CDD Peptidase_C1A 98 310 IPR039417 -
Spst11g00829 312 PRINTS Papain cysteine protease (C1) family signature 115 130 IPR000668 GO:0006508|GO:0008234
Spst11g00829 312 PRINTS Papain cysteine protease (C1) family signature 256 266 IPR000668 GO:0006508|GO:0008234
Spst11g00829 312 PRINTS Papain cysteine protease (C1) family signature 271 277 IPR000668 GO:0006508|GO:0008234
Spst11g00829 312 SMART Inhibitor_I29_2 14 71 IPR013201 -
Spst11g00829 312 Pfam Cathepsin propeptide inhibitor domain (I29) 14 71 IPR013201 -
Spst11g00829 312 Gene3D Cysteine proteinases 1 312 - -
Spst11g00829 312 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 115 126 IPR000169 -
Spst11g00829 312 SMART pept_c1 97 311 IPR000668 GO:0006508|GO:0008234
Spst11g00829 312 SUPERFAMILY Cysteine proteinases 6 311 IPR038765 -
Spst11g00829 312 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 254 264 IPR025660 -
Spst11g00829 312 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 5 304 IPR013128 GO:0008234
Spst11g00829 312 Pfam Papain family cysteine protease 97 310 IPR000668 GO:0006508|GO:0008234
Spst11g00829 312 FunFam Senescence-specific cysteine protease SAG39 1 312 - -
Spst11g00829 312 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 271 290 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00829 Spst-Chr11 32444597 32446099 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00829 - - gmx:100802616 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00829 11 32444597 32446099 Spst11g00829 11 32444597 32446099 ECH