Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00801 ATGGCTATTTCCACCAAACATCCACATTTGTTCAACCATATTAGGACTTTTGTAAGTGCAAAGGTCAAATGGGTCCGAGACCCATATCTTGATAATGCAGTCCTGAAAGAGAAAGATCTCAAACAGATAATTTCCCTCAAGAACCAAATCATTTCATCTCCTTCCAAATCCCTCTCCATCTATACTGCTTCTCAACTAAAAGCTTCCCACAACCTTCCCACTACGACTACCAAATTCATTGATAAATACGGTTGTGTCTTCACACAATTCCAACCTGGTCCTGGTCTTCCTCCTGTTGTCAAGCTCACTCCTCAAGCCTTTTCCCTCCACAAAGAAGAAATGGCTGTTCATAACTCTCCCACTAATCGCAAAGACACTGTTCAGAGACTTGCAAGGCTTCTAATGCTTGCTGGCATGGGAAAATTGCCTCTTTATGTAATTGAGAAGTTAAAGTGGGATATGGGTCTTCCTCATGATTATGTGACGAATCTTTTGGCTGATTACCCTGATTATTTTGATGTTTGTGTTGTGGAAGATCCGTCATCTGGAAAAGAATTGCTTGCTTTAGACCTTGTTTCATGGAGAAAAGAGCTTTCTGTGTCGGAGTTAGAAAAGAGGGCAATGAGCTTGGGCTTTAGTGGAGATAAAAGAAGGCATGATATTGCATTTCCCATATTTTTGCCGAAAGGTTTTGATTTAGCGAAGAGGGTAAAGACTTGGGTTGAGAATTGGCAAAAGTTGCCATACGTTTCTCCATATGAAGACGCATTTCATCTCGACTCAAATAGTGACCAAGCAGAGAAATGGACTGTGGCAATATTGCATGAGTTGCTTTCTCTTCTTGTGTCAAAGAAGACAGAAAGAGAAAATTTGATTTGTTTTGGAGAGTGTTTGGGATTGGCCTTGAGATTTAAGAAGGCTTTGGTTCATCATCCTGGCATATTTTACATTTCAAATAAGATTAGAACTCAGACTGTTGTACTTAGAGAGGCCTATTGTAAGGATATTTTGGTTAAGAAACATCCAGTGGTGGGATCTGTGATGGTCAATGGGCTGGTCCCGGCCATCATGGAGTTGCACAAAAACTCAAAAATGGAAGAACCTCACAAGCAACTAAACAAAAAATTTGATCATCTGGTTCTTGGGCCTGTTGCTGGACAAGGCTTGTCAAATCGTTTGCAATGCCGAGTGGATCAAAACTTGTGGGCCTACGCGGCCCACTACGGGTTTGCGCCAGCTACGCTGGAAAATTAA 1254 0.4147 MAISTKHPHLFNHIRTFVSAKVKWVRDPYLDNAVLKEKDLKQIISLKNQIISSPSKSLSIYTASQLKASHNLPTTTTKFIDKYGCVFTQFQPGPGLPPVVKLTPQAFSLHKEEMAVHNSPTNRKDTVQRLARLLMLAGMGKLPLYVIEKLKWDMGLPHDYVTNLLADYPDYFDVCVVEDPSSGKELLALDLVSWRKELSVSELEKRAMSLGFSGDKRRHDIAFPIFLPKGFDLAKRVKTWVENWQKLPYVSPYEDAFHLDSNSDQAEKWTVAILHELLSLLVSKKTERENLICFGECLGLALRFKKALVHHPGIFYISNKIRTQTVVLREAYCKDILVKKHPVVGSVMVNGLVPAIMELHKNSKMEEPHKQLNKKFDHLVLGPVAGQGLSNRLQCRVDQNLWAYAAHYGFAPATLEN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00801 417 Pfam Plant organelle RNA recognition domain 25 344 IPR021099 GO:0003723
Spst11g00801 417 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 16 345 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00801 Spst-Chr11 31806267 31810088 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00801 - - gmx:112997648 643.654