Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00758 ATGTCTAAAGTAGTATCATCATCATCACTTACAGTTTTCCCCCAGGATGCCAAACCCAACTCAAACTCCACTCGACACACTGCAACTTTTCATCCTTCCATTTGGGGAGATTATTTCCTCTCCTATGATCCTACTTCTGATGAAGATGATAGCCACGTCAAACAAGTTCCACTTTTGAAAGAGGATGTGAGGAAGATGATTGTCTCTCCTGTTGATTACAGTTCCCTTTTTAAATTAAACTTCATCAACTCAGTCCAACTTTTGGGCGTTTCTTATCATTTTGAACATGAAATTGATGAAGCACTGCATCAAATTTATGAGATTGCAACGAAGGACAATAACATCATAAGTCACGATGATGATCTTCATCATCTGGCTTTACTCTTTCGGTTGCTTAGACAACAAGGATATCGTATTTCGTCAGTATGTTATAACATTGGATTGCATCAGTATGGCCTAGTTTCGATCGAGAAGTGTCGTATAGACGAAACTGGAAACTTTAAGGAAAGCATAGTGAATGATGTAGAAGGAATGTTGAGCCTGTATGAAGCAGCCCAATTAAGAATCCATGGAGAAGAGATACTGGAAGAAGCATATAGTTTTACTCTCATTCAGTTAACTCGGTCATTAACCACCAAATTAAGCCCCTTTCTCTCTGGGTTAGTGCACCATAGCTTAGCACAGTCACTTCGCAAGGGAATGCCCAGGTGGTGGATTAAAGATTTGAATGTGTCAAAAAACTTTCCTTTTGTACGAGATAGGATTGTGGAAGTATGCTTCTGGATTTTAGGAGTGTACTATGAGCCGCAATATTGTCTTGCTAGAGGGATAATGATGAAAGTATTGGCCATAACATCCATCATTGATGATGTGTATGATGCCTATGGAACCATTGATGAGCTGAAGATTTTGACCAATGCAATAGAGAGGAAGGATATCTCCTCATTGGTTAATCTCCCAGAATATGTGAAGTTATGTTATGTCGCACTTTTTGATGTTTTTGAAGAAATACAGAAGGAGTTGAGAAAGCAAGGAAAAGAGTTCTTCGTCAAGTATGCTGAACAACAAATGAAAAGACTAGTCCAAGCGTATCTTACTCAGGCAACATGGTTTCATCACAACCACACACCAACCGTGGAGGAGTACATGGAAGTTGCGAGTATGTCGAGTGGTTTGGCTATGTTGACATCTGTATCTTTCTTGGGCATGGAAGACACAACAGAGGAGGCCCTCATATGGGCAACGAGTAACCCTAAATTGATTGTAGCTGCTTCAACTATTGGTAGGCTCACTAATGACATTGCTGGAAGTGAGTTTGAGCAAGAAAGAGGACACGTTGTCTCAAGCCTTGATTGCTATGTGAAGCAACACAATACCTCAAGGCAAAACGCCATTAAAGAACTGCTTAAGTTGATCGAGAGTGCTTGGAAGGACATTAATGAACAATGCCTTAATCCTACTCAACTTCCAATCGCTCTTCTTATGCGTGTTCTGAACCTTGCGCGCACGACGGATGTGATTTACAAAGATGGAGATCGCTATACAAATTCAGGAGGAATAATGAAGGATTACATCAAAGCTTTACTAGTTAATAAGATCCCTATATAA 1608 0.4005 MSKVVSSSSLTVFPQDAKPNSNSTRHTATFHPSIWGDYFLSYDPTSDEDDSHVKQVPLLKEDVRKMIVSPVDYSSLFKLNFINSVQLLGVSYHFEHEIDEALHQIYEIATKDNNIISHDDDLHHLALLFRLLRQQGYRISSVCYNIGLHQYGLVSIEKCRIDETGNFKESIVNDVEGMLSLYEAAQLRIHGEEILEEAYSFTLIQLTRSLTTKLSPFLSGLVHHSLAQSLRKGMPRWWIKDLNVSKNFPFVRDRIVEVCFWILGVYYEPQYCLARGIMMKVLAITSIIDDVYDAYGTIDELKILTNAIERKDISSLVNLPEYVKLCYVALFDVFEEIQKELRKQGKEFFVKYAEQQMKRLVQAYLTQATWFHHNHTPTVEEYMEVASMSSGLAMLTSVSFLGMEDTTEEALIWATSNPKLIVAASTIGRLTNDIAGSEFEQERGHVVSSLDCYVKQHNTSRQNAIKELLKLIESAWKDINEQCLNPTQLPIALLMRVLNLARTTDVIYKDGDRYTNSGGIMKDYIKALLVNKIPI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00758 535 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 533 IPR034741 -
Spst11g00758 535 SFLD Isoprenoid Synthase Type I 234 533 - -
Spst11g00758 535 FunFam Isoprene synthase, chloroplastic 220 523 - -
Spst11g00758 535 PANTHER OS04G0344100 PROTEIN-RELATED 236 522 - -
Spst11g00758 535 Pfam Terpene synthase, N-terminal domain 34 226 IPR001906 GO:0010333|GO:0016829
Spst11g00758 535 Gene3D - 73 236 IPR036965 GO:0010333|GO:0016829
Spst11g00758 535 Pfam Terpene synthase family, metal binding domain 236 478 IPR005630 GO:0000287|GO:0010333|GO:0016829
Spst11g00758 535 SUPERFAMILY Terpenoid synthases 232 535 IPR008949 -
Spst11g00758 535 CDD Terpene_cyclase_plant_C1 25 531 IPR044814 GO:0010333|GO:0016102
Spst11g00758 535 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 31 239 IPR008930 -
Spst11g00758 535 Gene3D Farnesyl Diphosphate Synthase 32 72 IPR008949 -
Spst11g00758 535 Gene3D Farnesyl Diphosphate Synthase 238 523 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00758 Spst-Chr11 31146113 31149746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00758 K15803 - gmx:100801358 749.199